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Temporal proteome and lipidome profiles reveal hepatitis C virus-associated reprogramming of hepatocellular metabolism and bioenergetics.
Diamond DL, Syder AJ, Jacobs JM, Sorensen CM, Walters KA, Proll SC, McDermott JE, Gritsenko MA, Zhang Q, Zhao R, Metz TO, Camp DG 2nd, Waters KM, Smith RD, Rice CM, Katze MG. Diamond DL, et al. Among authors: waters km. PLoS Pathog. 2010 Jan;6(1):e1000719. doi: 10.1371/journal.ppat.1000719. Epub 2010 Jan 8. PLoS Pathog. 2010. PMID: 20062526 Free PMC article.
Systems virology identifies a mitochondrial fatty acid oxidation enzyme, dodecenoyl coenzyme A delta isomerase, required for hepatitis C virus replication and likely pathogenesis.
Rasmussen AL, Diamond DL, McDermott JE, Gao X, Metz TO, Matzke MM, Carter VS, Belisle SE, Korth MJ, Waters KM, Smith RD, Katze MG. Rasmussen AL, et al. Among authors: waters km. J Virol. 2011 Nov;85(22):11646-54. doi: 10.1128/JVI.05605-11. Epub 2011 Sep 14. J Virol. 2011. PMID: 21917952 Free PMC article.
Proteome and computational analyses reveal new insights into the mechanisms of hepatitis C virus-mediated liver disease posttransplantation.
Diamond DL, Krasnoselsky AL, Burnum KE, Monroe ME, Webb-Robertson BJ, McDermott JE, Yeh MM, Dzib JF, Susnow N, Strom S, Proll SC, Belisle SE, Purdy DE, Rasmussen AL, Walters KA, Jacobs JM, Gritsenko MA, Camp DG, Bhattacharya R, Perkins JD, Carithers RL Jr, Liou IW, Larson AM, Benecke A, Waters KM, Smith RD, Katze MG. Diamond DL, et al. Among authors: waters km. Hepatology. 2012 Jul;56(1):28-38. doi: 10.1002/hep.25649. Epub 2012 Apr 24. Hepatology. 2012. PMID: 22331615 Free PMC article.
Cell type-dependent gene transcription profile in a three-dimensional human skin tissue model exposed to low doses of ionizing radiation: implications for medical exposures.
von Neubeck C, Shankaran H, Karin NJ, Kauer PM, Chrisler WB, Wang X, Robinson RJ, Waters KM, Tilton SC, Sowa MB. von Neubeck C, et al. Among authors: waters km. Environ Mol Mutagen. 2012 May;53(4):247-59. doi: 10.1002/em.21682. Epub 2012 Feb 20. Environ Mol Mutagen. 2012. PMID: 22351304
A comparative analysis of computational approaches to relative protein quantification using peptide peak intensities in label-free LC-MS proteomics experiments.
Matzke MM, Brown JN, Gritsenko MA, Metz TO, Pounds JG, Rodland KD, Shukla AK, Smith RD, Waters KM, McDermott JE, Webb-Robertson BJ. Matzke MM, et al. Among authors: waters km. Proteomics. 2013 Feb;13(3-4):493-503. doi: 10.1002/pmic.201200269. Epub 2012 Nov 8. Proteomics. 2013. PMID: 23019139 Free PMC article. Review.
233 results