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The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text.
Krallinger M, Vazquez M, Leitner F, Salgado D, Chatr-Aryamontri A, Winter A, Perfetto L, Briganti L, Licata L, Iannuccelli M, Castagnoli L, Cesareni G, Tyers M, Schneider G, Rinaldi F, Leaman R, Gonzalez G, Matos S, Kim S, Wilbur WJ, Rocha L, Shatkay H, Tendulkar AV, Agarwal S, Liu F, Wang X, Rak R, Noto K, Elkan C, Lu Z, Dogan RI, Fontaine JF, Andrade-Navarro MA, Valencia A. Krallinger M, et al. Among authors: kim s. BMC Bioinformatics. 2011 Oct 3;12 Suppl 8(Suppl 8):S3. doi: 10.1186/1471-2105-12-S8-S3. BMC Bioinformatics. 2011. PMID: 22151929 Free PMC article.
ezTag: tagging biomedical concepts via interactive learning.
Kwon D, Kim S, Wei CH, Leaman R, Lu Z. Kwon D, et al. Among authors: kim s. Nucleic Acids Res. 2018 Jul 2;46(W1):W523-W529. doi: 10.1093/nar/gky428. Nucleic Acids Res. 2018. PMID: 29788413 Free PMC article.
Retro: concept-based clustering of biomedical topical sets.
Yeganova L, Kim W, Kim S, Wilbur WJ. Yeganova L, et al. Among authors: kim w, kim s. Bioinformatics. 2014 Nov 15;30(22):3240-8. doi: 10.1093/bioinformatics/btu514. Epub 2014 Jul 29. Bioinformatics. 2014. PMID: 25075115 Free PMC article.
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