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The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text.
Krallinger M, Vazquez M, Leitner F, Salgado D, Chatr-Aryamontri A, Winter A, Perfetto L, Briganti L, Licata L, Iannuccelli M, Castagnoli L, Cesareni G, Tyers M, Schneider G, Rinaldi F, Leaman R, Gonzalez G, Matos S, Kim S, Wilbur WJ, Rocha L, Shatkay H, Tendulkar AV, Agarwal S, Liu F, Wang X, Rak R, Noto K, Elkan C, Lu Z, Dogan RI, Fontaine JF, Andrade-Navarro MA, Valencia A. Krallinger M, et al. Among authors: wang x. BMC Bioinformatics. 2011 Oct 3;12 Suppl 8(Suppl 8):S3. doi: 10.1186/1471-2105-12-S8-S3. BMC Bioinformatics. 2011. PMID: 22151929 Free PMC article.
Overview of BioCreative II gene normalization.
Morgan AA, Lu Z, Wang X, Cohen AM, Fluck J, Ruch P, Divoli A, Fundel K, Leaman R, Hakenberg J, Sun C, Liu HH, Torres R, Krauthammer M, Lau WW, Liu H, Hsu CN, Schuemie M, Cohen KB, Hirschman L. Morgan AA, et al. Among authors: wang x. Genome Biol. 2008;9 Suppl 2(Suppl 2):S3. doi: 10.1186/gb-2008-9-s2-s3. Epub 2008 Sep 1. Genome Biol. 2008. PMID: 18834494 Free PMC article.
Introducing meta-services for biomedical information extraction.
Leitner F, Krallinger M, Rodriguez-Penagos C, Hakenberg J, Plake C, Kuo CJ, Hsu CN, Tsai RT, Hung HC, Lau WW, Johnson CA, Saetre R, Yoshida K, Chen YH, Kim S, Shin SY, Zhang BT, Baumgartner WA Jr, Hunter L, Haddow B, Matthews M, Wang X, Ruch P, Ehrler F, Ozgür A, Erkan G, Radev DR, Krauthammer M, Luong T, Hoffmann R, Sander C, Valencia A. Leitner F, et al. Among authors: wang x. Genome Biol. 2008;9 Suppl 2(Suppl 2):S6. doi: 10.1186/gb-2008-9-s2-s6. Epub 2008 Sep 1. Genome Biol. 2008. PMID: 18834497 Free PMC article.
Automatic extraction of angiogenesis bioprocess from text.
Wang X, McKendrick I, Barrett I, Dix I, French T, Tsujii J, Ananiadou S. Wang X, et al. Bioinformatics. 2011 Oct 1;27(19):2730-7. doi: 10.1093/bioinformatics/btr460. Epub 2011 Aug 5. Bioinformatics. 2011. PMID: 21821664 Free PMC article.
Assisted curation: does text mining really help?
Alex B, Grover C, Haddow B, Kabadjov M, Klein E, Matthews M, Roebuck S, Tobin R, Wang X. Alex B, et al. Among authors: wang x. Pac Symp Biocomput. 2008:556-67. Pac Symp Biocomput. 2008. PMID: 18229715 Free article.
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