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Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes.
Xu X, Liu X, Ge S, Jensen JD, Hu F, Li X, Dong Y, Gutenkunst RN, Fang L, Huang L, Li J, He W, Zhang G, Zheng X, Zhang F, Li Y, Yu C, Kristiansen K, Zhang X, Wang J, Wright M, McCouch S, Nielsen R, Wang J, Wang W. Xu X, et al. Among authors: liu x. Nat Biotechnol. 2011 Dec 11;30(1):105-11. doi: 10.1038/nbt.2050. Nat Biotechnol. 2011. PMID: 22158310
Sequencing and automated whole-genome optical mapping of the genome of a domestic goat (Capra hircus).
Dong Y, Xie M, Jiang Y, Xiao N, Du X, Zhang W, Tosser-Klopp G, Wang J, Yang S, Liang J, Chen W, Chen J, Zeng P, Hou Y, Bian C, Pan S, Li Y, Liu X, Wang W, Servin B, Sayre B, Zhu B, Sweeney D, Moore R, Nie W, Shen Y, Zhao R, Zhang G, Li J, Faraut T, Womack J, Zhang Y, Kijas J, Cockett N, Xu X, Zhao S, Wang J, Wang W. Dong Y, et al. Among authors: liu x. Nat Biotechnol. 2013 Feb;31(2):135-41. doi: 10.1038/nbt.2478. Epub 2012 Dec 23. Nat Biotechnol. 2013. PMID: 23263233
Genome sequence of foxtail millet (Setaria italica) provides insights into grass evolution and biofuel potential.
Zhang G, Liu X, Quan Z, Cheng S, Xu X, Pan S, Xie M, Zeng P, Yue Z, Wang W, Tao Y, Bian C, Han C, Xia Q, Peng X, Cao R, Yang X, Zhan D, Hu J, Zhang Y, Li H, Li H, Li N, Wang J, Wang C, Wang R, Guo T, Cai Y, Liu C, Xiang H, Shi Q, Huang P, Chen Q, Li Y, Wang J, Zhao Z, Wang J. Zhang G, et al. Among authors: liu x, liu c. Nat Biotechnol. 2012 May 13;30(6):549-54. doi: 10.1038/nbt.2195. Nat Biotechnol. 2012. PMID: 22580950
Genomic landscapes of Chinese hamster ovary cell lines as revealed by the Cricetulus griseus draft genome.
Lewis NE, Liu X, Li Y, Nagarajan H, Yerganian G, O'Brien E, Bordbar A, Roth AM, Rosenbloom J, Bian C, Xie M, Chen W, Li N, Baycin-Hizal D, Latif H, Forster J, Betenbaugh MJ, Famili I, Xu X, Wang J, Palsson BO. Lewis NE, et al. Among authors: liu x. Nat Biotechnol. 2013 Aug;31(8):759-65. doi: 10.1038/nbt.2624. Epub 2013 Jul 21. Nat Biotechnol. 2013. PMID: 23873082
Single-cell exome sequencing and monoclonal evolution of a JAK2-negative myeloproliferative neoplasm.
Hou Y, Song L, Zhu P, Zhang B, Tao Y, Xu X, Li F, Wu K, Liang J, Shao D, Wu H, Ye X, Ye C, Wu R, Jian M, Chen Y, Xie W, Zhang R, Chen L, Liu X, Yao X, Zheng H, Yu C, Li Q, Gong Z, Mao M, Yang X, Yang L, Li J, Wang W, Lu Z, Gu N, Laurie G, Bolund L, Kristiansen K, Wang J, Yang H, Li Y, Zhang X, Wang J. Hou Y, et al. Among authors: liu x. Cell. 2012 Mar 2;148(5):873-85. doi: 10.1016/j.cell.2012.02.028. Cell. 2012. PMID: 22385957 Free article.
Maize HapMap2 identifies extant variation from a genome in flux.
Chia JM, Song C, Bradbury PJ, Costich D, de Leon N, Doebley J, Elshire RJ, Gaut B, Geller L, Glaubitz JC, Gore M, Guill KE, Holland J, Hufford MB, Lai J, Li M, Liu X, Lu Y, McCombie R, Nelson R, Poland J, Prasanna BM, Pyhäjärvi T, Rong T, Sekhon RS, Sun Q, Tenaillon MI, Tian F, Wang J, Xu X, Zhang Z, Kaeppler SM, Ross-Ibarra J, McMullen MD, Buckler ES, Zhang G, Xu Y, Ware D. Chia JM, et al. Among authors: liu x. Nat Genet. 2012 Jun 3;44(7):803-7. doi: 10.1038/ng.2313. Nat Genet. 2012. PMID: 22660545
Comparative population genomics reveals the domestication history of the peach, Prunus persica, and human influences on perennial fruit crops.
Cao K, Zheng Z, Wang L, Liu X, Zhu G, Fang W, Cheng S, Zeng P, Chen C, Wang X, Xie M, Zhong X, Wang X, Zhao P, Bian C, Zhu Y, Zhang J, Ma G, Chen C, Li Y, Hao F, Li Y, Huang G, Li Y, Li H, Guo J, Xu X, Wang J. Cao K, et al. Among authors: liu x. Genome Biol. 2014 Jul 31;15(7):415. doi: 10.1186/s13059-014-0415-1. Genome Biol. 2014. PMID: 25079967 Free PMC article.
The Tarenaya hassleriana genome provides insight into reproductive trait and genome evolution of crucifers.
Cheng S, van den Bergh E, Zeng P, Zhong X, Xu J, Liu X, Hofberger J, de Bruijn S, Bhide AS, Kuelahoglu C, Bian C, Chen J, Fan G, Kaufmann K, Hall JC, Becker A, Bräutigam A, Weber AP, Shi C, Zheng Z, Li W, Lv M, Tao Y, Wang J, Zou H, Quan Z, Hibberd JM, Zhang G, Zhu XG, Xu X, Schranz ME. Cheng S, et al. Among authors: liu x. Plant Cell. 2013 Aug;25(8):2813-30. doi: 10.1105/tpc.113.113480. Epub 2013 Aug 27. Plant Cell. 2013. PMID: 23983221 Free PMC article.
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