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An FDA bioinformatics tool for microbial genomics research on molecular characterization of bacterial foodborne pathogens using microarrays.
Fang H, Xu J, Ding D, Jackson SA, Patel IR, Frye JG, Zou W, Nayak R, Foley S, Chen J, Su Z, Ye Y, Turner S, Harris S, Zhou G, Cerniglia C, Tong W. Fang H, et al. Among authors: su z. BMC Bioinformatics. 2010 Oct 7;11 Suppl 6(Suppl 6):S4. doi: 10.1186/1471-2105-11-S6-S4. BMC Bioinformatics. 2010. PMID: 20946615 Free PMC article.
Cross-platform comparability of microarray technology: intra-platform consistency and appropriate data analysis procedures are essential.
Shi L, Tong W, Fang H, Scherf U, Han J, Puri RK, Frueh FW, Goodsaid FM, Guo L, Su Z, Han T, Fuscoe JC, Xu ZA, Patterson TA, Hong H, Xie Q, Perkins RG, Chen JJ, Casciano DA. Shi L, et al. Among authors: su z. BMC Bioinformatics. 2005 Jul 15;6 Suppl 2(Suppl 2):S12. doi: 10.1186/1471-2105-6-S2-S12. BMC Bioinformatics. 2005. PMID: 16026597 Free PMC article.
Microarray scanner calibration curves: characteristics and implications.
Shi L, Tong W, Su Z, Han T, Han J, Puri RK, Fang H, Frueh FW, Goodsaid FM, Guo L, Branham WS, Chen JJ, Xu ZA, Harris SC, Hong H, Xie Q, Perkins RG, Fuscoe JC. Shi L, et al. Among authors: su z. BMC Bioinformatics. 2005 Jul 15;6 Suppl 2(Suppl 2):S11. doi: 10.1186/1471-2105-6-S2-S11. BMC Bioinformatics. 2005. PMID: 16026596 Free PMC article.
The balance of reproducibility, sensitivity, and specificity of lists of differentially expressed genes in microarray studies.
Shi L, Jones WD, Jensen RV, Harris SC, Perkins RG, Goodsaid FM, Guo L, Croner LJ, Boysen C, Fang H, Qian F, Amur S, Bao W, Barbacioru CC, Bertholet V, Cao XM, Chu TM, Collins PJ, Fan XH, Frueh FW, Fuscoe JC, Guo X, Han J, Herman D, Hong H, Kawasaki ES, Li QZ, Luo Y, Ma Y, Mei N, Peterson RL, Puri RK, Shippy R, Su Z, Sun YA, Sun H, Thorn B, Turpaz Y, Wang C, Wang SJ, Warrington JA, Willey JC, Wu J, Xie Q, Zhang L, Zhang L, Zhong S, Wolfinger RD, Tong W. Shi L, et al. Among authors: su z. BMC Bioinformatics. 2008 Aug 12;9 Suppl 9(Suppl 9):S10. doi: 10.1186/1471-2105-9-S9-S10. BMC Bioinformatics. 2008. PMID: 18793455 Free PMC article.
7,894 results