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U-Compare bio-event meta-service: compatible BioNLP event extraction services.
Kano Y, Björne J, Ginter F, Salakoski T, Buyko E, Hahn U, Cohen KB, Verspoor K, Roeder C, Hunter LE, Kilicoglu H, Bergler S, Van Landeghem S, Van Parys T, Van de Peer Y, Miwa M, Ananiadou S, Neves M, Pascual-Montano A, Özgür A, Radev DR, Riedel S, Sætre R, Chun HW, Kim JD, Pyysalo S, Ohta T, Tsujii J. Kano Y, et al. Among authors: salakoski t. BMC Bioinformatics. 2011 Dec 18;12:481. doi: 10.1186/1471-2105-12-481. BMC Bioinformatics. 2011. PMID: 22177292 Free PMC article.
Complex event extraction at PubMed scale.
Björne J, Ginter F, Pyysalo S, Tsujii J, Salakoski T. Björne J, et al. Among authors: salakoski t. Bioinformatics. 2010 Jun 15;26(12):i382-90. doi: 10.1093/bioinformatics/btq180. Bioinformatics. 2010. PMID: 20529932 Free PMC article.
University of Turku in the BioNLP'11 Shared Task.
Björne J, Ginter F, Salakoski T. Björne J, et al. Among authors: salakoski t. BMC Bioinformatics. 2012 Jun 26;13 Suppl 11(Suppl 11):S4. doi: 10.1186/1471-2105-13-S11-S4. BMC Bioinformatics. 2012. PMID: 22759458 Free PMC article.
TEES 2.2: Biomedical Event Extraction for Diverse Corpora.
Björne J, Salakoski T. Björne J, et al. Among authors: salakoski t. BMC Bioinformatics. 2015;16 Suppl 16(Suppl 16):S4. doi: 10.1186/1471-2105-16-S16-S4. Epub 2015 Oct 30. BMC Bioinformatics. 2015. PMID: 26551925 Free PMC article.
BioInfer: a corpus for information extraction in the biomedical domain.
Pyysalo S, Ginter F, Heimonen J, Björne J, Boberg J, Järvinen J, Salakoski T. Pyysalo S, et al. Among authors: salakoski t. BMC Bioinformatics. 2007 Feb 9;8:50. doi: 10.1186/1471-2105-8-50. BMC Bioinformatics. 2007. PMID: 17291334 Free PMC article.
Comparative analysis of five protein-protein interaction corpora.
Pyysalo S, Airola A, Heimonen J, Björne J, Ginter F, Salakoski T. Pyysalo S, et al. Among authors: salakoski t. BMC Bioinformatics. 2008 Apr 11;9 Suppl 3(Suppl 3):S6. doi: 10.1186/1471-2105-9-S3-S6. BMC Bioinformatics. 2008. PMID: 18426551 Free PMC article.
Large-scale event extraction from literature with multi-level gene normalization.
Van Landeghem S, Björne J, Wei CH, Hakala K, Pyysalo S, Ananiadou S, Kao HY, Lu Z, Salakoski T, Van de Peer Y, Ginter F. Van Landeghem S, et al. Among authors: salakoski t. PLoS One. 2013 Apr 17;8(4):e55814. doi: 10.1371/journal.pone.0055814. Print 2013. PLoS One. 2013. PMID: 23613707 Free PMC article.
53 results