Barua D - Search Results

1

A computational model for early events in B cell antigen receptor signaling: analysis of the roles of Lyn and Fyn.

Barua D, Hlavacek WS, Lipniacki T. Barua D, et al. J Immunol. 2012 Jul 15;189(2):646-58. doi: 10.4049/jimmunol.1102003. Epub 2012 Jun 18. J Immunol. 2012. PMID: 22711887 Free PMC article.

2

Modeling the effect of APC truncation on destruction complex function in colorectal cancer cells.

Barua D, Hlavacek WS. Barua D, et al. PLoS Comput Biol. 2013;9(9):e1003217. doi: 10.1371/journal.pcbi.1003217. Epub 2013 Sep 26. PLoS Comput Biol. 2013. PMID: 24086117 Free PMC article.

3

Modeling cell line-specific recruitment of signaling proteins to the insulin-like growth factor 1 receptor.

Erickson KE, Rukhlenko OS, Shahinuzzaman M, Slavkova KP, Lin YT, Suderman R, Stites EC, Anghel M, Posner RG, Barua D, Kholodenko BN, Hlavacek WS. Erickson KE, et al. Among authors: barua d. PLoS Comput Biol. 2019 Jan 17;15(1):e1006706. doi: 10.1371/journal.pcbi.1006706. eCollection 2019 Jan. PLoS Comput Biol. 2019. PMID: 30653502 Free PMC article.

4

Single-cell measurements of IgE-mediated FcεRI signaling using an integrated microfluidic platform.

Liu Y, Barua D, Liu P, Wilson BS, Oliver JM, Hlavacek WS, Singh AK. Liu Y, et al. Among authors: barua d. PLoS One. 2013;8(3):e60159. doi: 10.1371/journal.pone.0060159. Epub 2013 Mar 27. PLoS One. 2013. PMID: 23544131 Free PMC article.

5

Exploring higher-order EGFR oligomerisation and phosphorylation--a combined experimental and theoretical approach.

Kozer N, Barua D, Orchard S, Nice EC, Burgess AW, Hlavacek WS, Clayton AH. Kozer N, et al. Among authors: barua d. Mol Biosyst. 2013 Jul;9(7):1849-63. doi: 10.1039/c3mb70073a. Epub 2013 Apr 30. Mol Biosyst. 2013. PMID: 23629589 Free PMC article.

6

Computational model for autophagic vesicle dynamics in single cells.

Martin KR, Barua D, Kauffman AL, Westrate LM, Posner RG, Hlavacek WS, Mackeigan JP. Martin KR, et al. Among authors: barua d. Autophagy. 2013 Jan;9(1):74-92. doi: 10.4161/auto.22532. Epub 2012 Nov 29. Autophagy. 2013. PMID: 23196898 Free PMC article.

7

Optimal aggregation of FcεRI with a structurally defined trivalent ligand overrides negative regulation driven by phosphatases.

Mahajan A, Barua D, Cutler P, Lidke DS, Espinoza FA, Pehlke C, Grattan R, Kawakami Y, Tung CS, Bradbury AR, Hlavacek WS, Wilson BS. Mahajan A, et al. Among authors: barua d. ACS Chem Biol. 2014 Jul 18;9(7):1508-19. doi: 10.1021/cb500134t. Epub 2014 May 15. ACS Chem Biol. 2014. PMID: 24784318 Free PMC article.

8

Recruitment of the adaptor protein Grb2 to EGFR tetramers.

Kozer N, Barua D, Henderson C, Nice EC, Burgess AW, Hlavacek WS, Clayton AH. Kozer N, et al. Among authors: barua d. Biochemistry. 2014 Apr 29;53(16):2594-604. doi: 10.1021/bi500182x. Epub 2014 Apr 21. Biochemistry. 2014. PMID: 24697349 Free PMC article.

9

A mechanistic model of early FcεRI signaling: lipid rafts and the question of protection from dephosphorylation.

Barua D, Goldstein B. Barua D, et al. PLoS One. 2012;7(12):e51669. doi: 10.1371/journal.pone.0051669. Epub 2012 Dec 17. PLoS One. 2012. PMID: 23284735 Free PMC article.

10

Analysis of Fn14-NF-κB signaling response dynamics using a mechanistic model.

Khetan J, Barua D. Khetan J, et al. Among authors: barua d. J Theor Biol. 2019 Nov 7;480:34-42. doi: 10.1016/j.jtbi.2019.07.016. Epub 2019 Jul 30. J Theor Biol. 2019. PMID: 31374284

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