Gnirke A - Search Results

1

DNA methylation dynamics during in vivo differentiation of blood and skin stem cells.

Bock C, Beerman I, Lien WH, Smith ZD, Gu H, Boyle P, Gnirke A, Fuchs E, Rossi DJ, Meissner A. Bock C, et al. Among authors: gnirke a. Mol Cell. 2012 Aug 24;47(4):633-47. doi: 10.1016/j.molcel.2012.06.019. Epub 2012 Jul 26. Mol Cell. 2012. PMID: 22841485 Free PMC article.

2

Reprogramming factor expression initiates widespread targeted chromatin remodeling.

Koche RP, Smith ZD, Adli M, Gu H, Ku M, Gnirke A, Bernstein BE, Meissner A. Koche RP, et al. Among authors: gnirke a. Cell Stem Cell. 2011 Jan 7;8(1):96-105. doi: 10.1016/j.stem.2010.12.001. Cell Stem Cell. 2011. PMID: 21211784 Free PMC article.

3

Reference Maps of human ES and iPS cell variation enable high-throughput characterization of pluripotent cell lines.

Bock C, Kiskinis E, Verstappen G, Gu H, Boulting G, Smith ZD, Ziller M, Croft GF, Amoroso MW, Oakley DH, Gnirke A, Eggan K, Meissner A. Bock C, et al. Among authors: gnirke a. Cell. 2011 Feb 4;144(3):439-52. doi: 10.1016/j.cell.2010.12.032. Cell. 2011. PMID: 21295703 Free PMC article.

4

Genomic distribution and inter-sample variation of non-CpG methylation across human cell types.

Ziller MJ, Müller F, Liao J, Zhang Y, Gu H, Bock C, Boyle P, Epstein CB, Bernstein BE, Lengauer T, Gnirke A, Meissner A. Ziller MJ, et al. Among authors: gnirke a. PLoS Genet. 2011 Dec;7(12):e1002389. doi: 10.1371/journal.pgen.1002389. Epub 2011 Dec 8. PLoS Genet. 2011. PMID: 22174693 Free PMC article.

5

A unique regulatory phase of DNA methylation in the early mammalian embryo.

Smith ZD, Chan MM, Mikkelsen TS, Gu H, Gnirke A, Regev A, Meissner A. Smith ZD, et al. Among authors: gnirke a. Nature. 2012 Mar 28;484(7394):339-44. doi: 10.1038/nature10960. Nature. 2012. PMID: 22456710 Free PMC article.

6

Transcriptional and epigenetic dynamics during specification of human embryonic stem cells.

Gifford CA, Ziller MJ, Gu H, Trapnell C, Donaghey J, Tsankov A, Shalek AK, Kelley DR, Shishkin AA, Issner R, Zhang X, Coyne M, Fostel JL, Holmes L, Meldrim J, Guttman M, Epstein C, Park H, Kohlbacher O, Rinn J, Gnirke A, Lander ES, Bernstein BE, Meissner A. Gifford CA, et al. Among authors: gnirke a. Cell. 2013 May 23;153(5):1149-63. doi: 10.1016/j.cell.2013.04.037. Epub 2013 May 9. Cell. 2013. PMID: 23664763 Free PMC article.

7

Transcription factor binding dynamics during human ES cell differentiation.

Tsankov AM, Gu H, Akopian V, Ziller MJ, Donaghey J, Amit I, Gnirke A, Meissner A. Tsankov AM, et al. Among authors: gnirke a. Nature. 2015 Feb 19;518(7539):344-9. doi: 10.1038/nature14233. Nature. 2015. PMID: 25693565 Free PMC article.

8

Global delay in nascent strand DNA methylation.

Charlton J, Downing TL, Smith ZD, Gu H, Clement K, Pop R, Akopian V, Klages S, Santos DP, Tsankov AM, Timmermann B, Ziller MJ, Kiskinis E, Gnirke A, Meissner A. Charlton J, et al. Among authors: gnirke a. Nat Struct Mol Biol. 2018 Apr;25(4):327-332. doi: 10.1038/s41594-018-0046-4. Epub 2018 Mar 12. Nat Struct Mol Biol. 2018. PMID: 29531288 Free PMC article.

9

Dissecting the Functional Consequences of De Novo DNA Methylation Dynamics in Human Motor Neuron Differentiation and Physiology.

Ziller MJ, Ortega JA, Quinlan KA, Santos DP, Gu H, Martin EJ, Galonska C, Pop R, Maidl S, Di Pardo A, Huang M, Meltzer HY, Gnirke A, Heckman CJ, Meissner A, Kiskinis E. Ziller MJ, et al. Among authors: gnirke a. Cell Stem Cell. 2018 Apr 5;22(4):559-574.e9. doi: 10.1016/j.stem.2018.02.012. Epub 2018 Mar 15. Cell Stem Cell. 2018. PMID: 29551301 Free PMC article.

10

Notch-mediated expansion of cord blood progenitors: maintenance of transcriptional and epigenetic fidelity.

Dahlberg A, Woo S, Delaney C, Boyle P, Gnirke A, Bock C, Bernstein BE, Meissner A, Gottardo R, Bernstein ID. Dahlberg A, et al. Among authors: gnirke a. Leukemia. 2015 Sep;29(9):1948-51. doi: 10.1038/leu.2015.61. Epub 2015 Mar 6. Leukemia. 2015. PMID: 25742749 Free PMC article. No abstract available.

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