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A simple and novel method for RNA-seq library preparation of single cell cDNA analysis by hyperactive Tn5 transposase.
Brouilette S, Kuersten S, Mein C, Bozek M, Terry A, Dias KR, Bhaw-Rosun L, Shintani Y, Coppen S, Ikebe C, Sawhney V, Campbell N, Kaneko M, Tano N, Ishida H, Suzuki K, Yashiro K. Brouilette S, et al. Among authors: kuersten s. Dev Dyn. 2012 Oct;241(10):1584-90. doi: 10.1002/dvdy.23850. Epub 2012 Aug 28. Dev Dyn. 2012. PMID: 22911638 Free article.
Transposase mediated construction of RNA-seq libraries.
Gertz J, Varley KE, Davis NS, Baas BJ, Goryshin IY, Vaidyanathan R, Kuersten S, Myers RM. Gertz J, et al. Among authors: kuersten s. Genome Res. 2012 Jan;22(1):134-41. doi: 10.1101/gr.127373.111. Epub 2011 Nov 29. Genome Res. 2012. PMID: 22128135 Free PMC article.
Widespread transcription at neuronal activity-regulated enhancers.
Kim TK, Hemberg M, Gray JM, Costa AM, Bear DM, Wu J, Harmin DA, Laptewicz M, Barbara-Haley K, Kuersten S, Markenscoff-Papadimitriou E, Kuhl D, Bito H, Worley PF, Kreiman G, Greenberg ME. Kim TK, et al. Among authors: kuersten s. Nature. 2010 May 13;465(7295):182-7. doi: 10.1038/nature09033. Epub 2010 Apr 14. Nature. 2010. PMID: 20393465 Free PMC article.
Deep-transcriptome and ribonome sequencing redefines the molecular networks of pluripotency and the extracellular space in human embryonic stem cells.
Kolle G, Shepherd JL, Gardiner B, Kassahn KS, Cloonan N, Wood DL, Nourbakhsh E, Taylor DF, Wani S, Chy HS, Zhou Q, McKernan K, Kuersten S, Laslett AL, Grimmond SM. Kolle G, et al. Among authors: kuersten s. Genome Res. 2011 Dec;21(12):2014-25. doi: 10.1101/gr.119321.110. Epub 2011 Oct 31. Genome Res. 2011. PMID: 22042643 Free PMC article.
MicroRNAs and their isomiRs function cooperatively to target common biological pathways.
Cloonan N, Wani S, Xu Q, Gu J, Lea K, Heater S, Barbacioru C, Steptoe AL, Martin HC, Nourbakhsh E, Krishnan K, Gardiner B, Wang X, Nones K, Steen JA, Matigian NA, Wood DL, Kassahn KS, Waddell N, Shepherd J, Lee C, Ichikawa J, McKernan K, Bramlett K, Kuersten S, Grimmond SM. Cloonan N, et al. Among authors: kuersten s. Genome Biol. 2011 Dec 30;12(12):R126. doi: 10.1186/gb-2011-12-12-r126. Genome Biol. 2011. PMID: 22208850 Free PMC article.
Tumor transcriptome sequencing reveals allelic expression imbalances associated with copy number alterations.
Tuch BB, Laborde RR, Xu X, Gu J, Chung CB, Monighetti CK, Stanley SJ, Olsen KD, Kasperbauer JL, Moore EJ, Broomer AJ, Tan R, Brzoska PM, Muller MW, Siddiqui AS, Asmann YW, Sun Y, Kuersten S, Barker MA, De La Vega FM, Smith DI. Tuch BB, et al. Among authors: kuersten s. PLoS One. 2010 Feb 19;5(2):e9317. doi: 10.1371/journal.pone.0009317. PLoS One. 2010. PMID: 20174472 Free PMC article.
44 results