Baulcombe DC - Search Results

1

Metastable differentially methylated regions within Arabidopsis inbred populations are associated with modified expression of non-coding transcripts.

Havecker ER, Wallbridge LM, Fedito P, Hardcastle TJ, Baulcombe DC. Havecker ER, et al. Among authors: baulcombe dc. PLoS One. 2012;7(9):e45242. doi: 10.1371/journal.pone.0045242. Epub 2012 Sep 20. PLoS One. 2012. PMID: 23028873 Free PMC article.

2

The Arabidopsis RNA-directed DNA methylation argonautes functionally diverge based on their expression and interaction with target loci.

Havecker ER, Wallbridge LM, Hardcastle TJ, Bush MS, Kelly KA, Dunn RM, Schwach F, Doonan JH, Baulcombe DC. Havecker ER, et al. Among authors: baulcombe dc. Plant Cell. 2010 Feb;22(2):321-34. doi: 10.1105/tpc.109.072199. Epub 2010 Feb 19. Plant Cell. 2010. PMID: 20173091 Free PMC article.

3

Towards annotating the plant epigenome: the Arabidopsis thaliana small RNA locus map.

Hardcastle TJ, Müller SY, Baulcombe DC. Hardcastle TJ, et al. Among authors: baulcombe dc. Sci Rep. 2018 Apr 20;8(1):6338. doi: 10.1038/s41598-018-24515-8. Sci Rep. 2018. PMID: 29679055 Free PMC article.

4

Evidence for large complex networks of plant short silencing RNAs.

MacLean D, Elina N, Havecker ER, Heimstaedt SB, Studholme DJ, Baulcombe DC. MacLean D, et al. Among authors: baulcombe dc. PLoS One. 2010 Mar 26;5(3):e9901. doi: 10.1371/journal.pone.0009901. PLoS One. 2010. PMID: 20360863 Free PMC article.

5

Small silencing RNAs in plants are mobile and direct epigenetic modification in recipient cells.

Molnar A, Melnyk CW, Bassett A, Hardcastle TJ, Dunn R, Baulcombe DC. Molnar A, et al. Among authors: baulcombe dc. Science. 2010 May 14;328(5980):872-5. doi: 10.1126/science.1187959. Epub 2010 Apr 22. Science. 2010. PMID: 20413459

6

Identifying small interfering RNA loci from high-throughput sequencing data.

Hardcastle TJ, Kelly KA, Baulcombe DC. Hardcastle TJ, et al. Among authors: baulcombe dc. Bioinformatics. 2012 Feb 15;28(4):457-63. doi: 10.1093/bioinformatics/btr687. Epub 2011 Dec 9. Bioinformatics. 2012. PMID: 22171331

7

Mobile small RNAs regulate genome-wide DNA methylation.

Lewsey MG, Hardcastle TJ, Melnyk CW, Molnar A, Valli A, Urich MA, Nery JR, Baulcombe DC, Ecker JR. Lewsey MG, et al. Among authors: baulcombe dc. Proc Natl Acad Sci U S A. 2016 Feb 9;113(6):E801-10. doi: 10.1073/pnas.1515072113. Epub 2016 Jan 19. Proc Natl Acad Sci U S A. 2016. PMID: 26787884 Free PMC article.

8

A novel DCL2-dependent miRNA pathway in tomato affects susceptibility to RNA viruses.

Wang Z, Hardcastle TJ, Canto Pastor A, Yip WH, Tang S, Baulcombe DC. Wang Z, et al. Among authors: baulcombe dc. Genes Dev. 2018 Sep 1;32(17-18):1155-1160. doi: 10.1101/gad.313601.118. Epub 2018 Aug 27. Genes Dev. 2018. PMID: 30150254 Free PMC article.

9

The Polerovirus silencing suppressor P0 targets ARGONAUTE proteins for degradation.

Baumberger N, Tsai CH, Lie M, Havecker E, Baulcombe DC. Baumberger N, et al. Among authors: baulcombe dc. Curr Biol. 2007 Sep 18;17(18):1609-14. doi: 10.1016/j.cub.2007.08.039. Curr Biol. 2007. PMID: 17869110 Free article.

10

The use of duplex-specific nuclease in ribosome profiling and a user-friendly software package for Ribo-seq data analysis.

Chung BY, Hardcastle TJ, Jones JD, Irigoyen N, Firth AE, Baulcombe DC, Brierley I. Chung BY, et al. Among authors: baulcombe dc. RNA. 2015 Oct;21(10):1731-45. doi: 10.1261/rna.052548.115. Epub 2015 Aug 18. RNA. 2015. PMID: 26286745 Free PMC article.

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