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Evaluating methods for isolating total RNA and predicting the success of sequencing phylogenetically diverse plant transcriptomes.
Johnson MT, Carpenter EJ, Tian Z, Bruskiewich R, Burris JN, Carrigan CT, Chase MW, Clarke ND, Covshoff S, Depamphilis CW, Edger PP, Goh F, Graham S, Greiner S, Hibberd JM, Jordon-Thaden I, Kutchan TM, Leebens-Mack J, Melkonian M, Miles N, Myburg H, Patterson J, Pires JC, Ralph P, Rolf M, Sage RF, Soltis D, Soltis P, Stevenson D, Stewart CN Jr, Surek B, Thomsen CJ, Villarreal JC, Wu X, Zhang Y, Deyholos MK, Wong GK. Johnson MT, et al. PLoS One. 2012;7(11):e50226. doi: 10.1371/journal.pone.0050226. Epub 2012 Nov 21. PLoS One. 2012. PMID: 23185583 Free PMC article.
EST clustering error evaluation and correction.
Wang JP, Lindsay BG, Leebens-Mack J, Cui L, Wall K, Miller WC, dePamphilis CW. Wang JP, et al. Bioinformatics. 2004 Nov 22;20(17):2973-84. doi: 10.1093/bioinformatics/bth342. Epub 2004 Jun 9. Bioinformatics. 2004. PMID: 15189818
Floral gene resources from basal angiosperms for comparative genomics research.
Albert VA, Soltis DE, Carlson JE, Farmerie WG, Wall PK, Ilut DC, Solow TM, Mueller LA, Landherr LL, Hu Y, Buzgo M, Kim S, Yoo MJ, Frohlich MW, Perl-Treves R, Schlarbaum SE, Bliss BJ, Zhang X, Tanksley SD, Oppenheimer DG, Soltis PS, Ma H, DePamphilis CW, Leebens-Mack JH. Albert VA, et al. BMC Plant Biol. 2005 Mar 30;5:5. doi: 10.1186/1471-2229-5-5. BMC Plant Biol. 2005. PMID: 15799777 Free PMC article.
Methods for obtaining and analyzing whole chloroplast genome sequences.
Jansen RK, Raubeson LA, Boore JL, dePamphilis CW, Chumley TW, Haberle RC, Wyman SK, Alverson AJ, Peery R, Herman SJ, Fourcade HM, Kuehl JV, McNeal JR, Leebens-Mack J, Cui L. Jansen RK, et al. Methods Enzymol. 2005;395:348-84. doi: 10.1016/S0076-6879(05)95020-9. Methods Enzymol. 2005. PMID: 15865976
160 results