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A knowledge-driven protocol for prediction of proteins of interest with an emphasis on biosynthetic pathways.
Joshi AG, Harini K, Meenakshi I, Shafi KM, Pasha SN, Mahita J, Sajeevan RS, Karpe SD, Ghosh P, Nitish S, Gandhimathi A, Mathew OK, Prasanna SH, Malini M, Mutt E, Naika M, Ravooru N, Rao RM, Shingate PN, Sukhwal A, Sunitha MS, Upadhyay AK, Vinekar RS, Sowdhamini R. Joshi AG, et al. Among authors: sunitha ms. MethodsX. 2020 Sep 2;7:101053. doi: 10.1016/j.mex.2020.101053. eCollection 2020. MethodsX. 2020. PMID: 33024710 Free PMC article.
Genome sequencing of herb Tulsi (Ocimum tenuiflorum) unravels key genes behind its strong medicinal properties.
Upadhyay AK, Chacko AR, Gandhimathi A, Ghosh P, Harini K, Joseph AP, Joshi AG, Karpe SD, Kaushik S, Kuravadi N, Lingu CS, Mahita J, Malarini R, Malhotra S, Malini M, Mathew OK, Mutt E, Naika M, Nitish S, Pasha SN, Raghavender US, Rajamani A, Shilpa S, Shingate PN, Singh HR, Sukhwal A, Sunitha MS, Sumathi M, Ramaswamy S, Gowda M, Sowdhamini R. Upadhyay AK, et al. Among authors: sunitha ms. BMC Plant Biol. 2015 Aug 28;15:212. doi: 10.1186/s12870-015-0562-x. BMC Plant Biol. 2015. PMID: 26315624 Free PMC article.
The transcriptome enables the identification of candidate genes behind medicinal value of Drumstick tree (Moringa oleifera).
Pasha SN, Shafi KM, Joshi AG, Meenakshi I, Harini K, Mahita J, Sajeevan RS, Karpe SD, Ghosh P, Nitish S, Gandhimathi A, Mathew OK, Prasanna SH, Malini M, Mutt E, Naika M, Ravooru N, Rao RM, Shingate PN, Sukhwal A, Sunitha MS, Upadhyay AK, Vinekar RS, Sowdhamini R. Pasha SN, et al. Among authors: sunitha ms. Genomics. 2020 Jan;112(1):621-628. doi: 10.1016/j.ygeno.2019.04.014. Epub 2019 Apr 29. Genomics. 2020. PMID: 31048014 Free article.
Dataset for the combined transcriptome assembly of M. oleifera and functional annotation.
Shafi KM, Joshi AG, Meenakshi I, Pasha SN, Harini K, Mahita J, Sajeevan RS, Karpe SD, Ghosh P, Nitish S, Gandhimathi A, Mathew OK, Prasanna SH, Malini M, Mutt E, Naika M, Ravooru N, Rao RM, Shingate PN, Sukhwal A, Sunitha MS, Upadhyay AK, Vinekar RS, Sowdhamini R. Shafi KM, et al. Among authors: sunitha ms. Data Brief. 2020 Mar 20;30:105416. doi: 10.1016/j.dib.2020.105416. eCollection 2020 Jun. Data Brief. 2020. PMID: 32309524 Free PMC article.
Mechanistic heterogeneity in contractile properties of α-tropomyosin (TPM1) mutants associated with inherited cardiomyopathies.
Gupte TM, Haque F, Gangadharan B, Sunitha MS, Mukherjee S, Anandhan S, Rani DS, Mukundan N, Jambekar A, Thangaraj K, Sowdhamini R, Sommese RF, Nag S, Spudich JA, Mercer JA. Gupte TM, et al. Among authors: sunitha ms. J Biol Chem. 2015 Mar 13;290(11):7003-15. doi: 10.1074/jbc.M114.596676. Epub 2014 Dec 29. J Biol Chem. 2015. PMID: 25548289 Free PMC article.
Multidimensional structure-function relationships in human β-cardiac myosin from population-scale genetic variation.
Homburger JR, Green EM, Caleshu C, Sunitha MS, Taylor RE, Ruppel KM, Metpally RP, Colan SD, Michels M, Day SM, Olivotto I, Bustamante CD, Dewey FE, Ho CY, Spudich JA, Ashley EA. Homburger JR, et al. Among authors: sunitha ms. Proc Natl Acad Sci U S A. 2016 Jun 14;113(24):6701-6. doi: 10.1073/pnas.1606950113. Epub 2016 May 31. Proc Natl Acad Sci U S A. 2016. PMID: 27247418 Free PMC article.
14 results