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KEGG OC: a large-scale automatic construction of taxonomy-based ortholog clusters.
Nakaya A, Katayama T, Itoh M, Hiranuka K, Kawashima S, Moriya Y, Okuda S, Tanaka M, Tokimatsu T, Yamanishi Y, Yoshizawa AC, Kanehisa M, Goto S. Nakaya A, et al. Among authors: katayama t. Nucleic Acids Res. 2013 Jan;41(Database issue):D353-7. doi: 10.1093/nar/gks1239. Epub 2012 Nov 27. Nucleic Acids Res. 2013. PMID: 23193276 Free PMC article.
From genomics to chemical genomics: new developments in KEGG.
Kanehisa M, Goto S, Hattori M, Aoki-Kinoshita KF, Itoh M, Kawashima S, Katayama T, Araki M, Hirakawa M. Kanehisa M, et al. Among authors: katayama t. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D354-7. doi: 10.1093/nar/gkj102. Nucleic Acids Res. 2006. PMID: 16381885 Free PMC article.
AAindex: amino acid index database, progress report 2008.
Kawashima S, Pokarowski P, Pokarowska M, Kolinski A, Katayama T, Kanehisa M. Kawashima S, et al. Among authors: katayama t. Nucleic Acids Res. 2008 Jan;36(Database issue):D202-5. doi: 10.1093/nar/gkm998. Epub 2007 Nov 12. Nucleic Acids Res. 2008. PMID: 17998252 Free PMC article.
KEGG for linking genomes to life and the environment.
Kanehisa M, Araki M, Goto S, Hattori M, Hirakawa M, Itoh M, Katayama T, Kawashima S, Okuda S, Tokimatsu T, Yamanishi Y. Kanehisa M, et al. Among authors: katayama t. Nucleic Acids Res. 2008 Jan;36(Database issue):D480-4. doi: 10.1093/nar/gkm882. Epub 2007 Dec 12. Nucleic Acids Res. 2008. PMID: 18077471 Free PMC article.
KEGG Atlas mapping for global analysis of metabolic pathways.
Okuda S, Yamada T, Hamajima M, Itoh M, Katayama T, Bork P, Goto S, Kanehisa M. Okuda S, et al. Among authors: katayama t. Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W423-6. doi: 10.1093/nar/gkn282. Epub 2008 May 13. Nucleic Acids Res. 2008. PMID: 18477636 Free PMC article.
The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications.
Katayama T, Wilkinson MD, Vos R, Kawashima T, Kawashima S, Nakao M, Yamamoto Y, Chun HW, Yamaguchi A, Kawano S, Aerts J, Aoki-Kinoshita KF, Arakawa K, Aranda B, Bonnal RJ, Fernández JM, Fujisawa T, Gordon PM, Goto N, Haider S, Harris T, Hatakeyama T, Ho I, Itoh M, Kasprzyk A, Kido N, Kim YJ, Kinjo AR, Konishi F, Kovarskaya Y, von Kuster G, Labarga A, Limviphuvadh V, McCarthy L, Nakamura Y, Nam Y, Nishida K, Nishimura K, Nishizawa T, Ogishima S, Oinn T, Okamoto S, Okuda S, Ono K, Oshita K, Park KJ, Putnam N, Senger M, Severin J, Shigemoto Y, Sugawara H, Taylor J, Trelles O, Yamasaki C, Yamashita R, Satoh N, Takagi T. Katayama T, et al. J Biomed Semantics. 2011 Aug 2;2:4. doi: 10.1186/2041-1480-2-4. J Biomed Semantics. 2011. PMID: 21806842 Free PMC article.
Comparative genome analysis of three eukaryotic parasites with differing abilities to transform leukocytes reveals key mediators of Theileria-induced leukocyte transformation.
Hayashida K, Hara Y, Abe T, Yamasaki C, Toyoda A, Kosuge T, Suzuki Y, Sato Y, Kawashima S, Katayama T, Wakaguri H, Inoue N, Homma K, Tada-Umezaki M, Yagi Y, Fujii Y, Habara T, Kanehisa M, Watanabe H, Ito K, Gojobori T, Sugawara H, Imanishi T, Weir W, Gardner M, Pain A, Shiels B, Hattori M, Nene V, Sugimoto C. Hayashida K, et al. Among authors: katayama t. mBio. 2012 Sep 4;3(5):e00204-12. doi: 10.1128/mBio.00204-12. Print 2012. mBio. 2012. PMID: 22951932 Free PMC article.
1,756 results