Liu Y - Search Results

1

A comprehensive nuclear receptor network for breast cancer cells.

Kittler R, Zhou J, Hua S, Ma L, Liu Y, Pendleton E, Cheng C, Gerstein M, White KP. Kittler R, et al. Among authors: liu y. Cell Rep. 2013 Feb 21;3(2):538-51. doi: 10.1016/j.celrep.2013.01.004. Epub 2013 Jan 31. Cell Rep. 2013. PMID: 23375374 Free article.

2

RNA-seq differential expression studies: more sequence or more replication?

Liu Y, Zhou J, White KP. Liu Y, et al. Bioinformatics. 2014 Feb 1;30(3):301-4. doi: 10.1093/bioinformatics/btt688. Epub 2013 Dec 6. Bioinformatics. 2014. PMID: 24319002 Free PMC article.

3

Systematic identification of regulatory variants associated with cancer risk.

Liu S, Liu Y, Zhang Q, Wu J, Liang J, Yu S, Wei GH, White KP, Wang X. Liu S, et al. Among authors: liu y. Genome Biol. 2017 Oct 23;18(1):194. doi: 10.1186/s13059-017-1322-z. Genome Biol. 2017. PMID: 29061142 Free PMC article.

4

Functional assessment of human enhancer activities using whole-genome STARR-sequencing.

Liu Y, Yu S, Dhiman VK, Brunetti T, Eckart H, White KP. Liu Y, et al. Genome Biol. 2017 Nov 20;18(1):219. doi: 10.1186/s13059-017-1345-5. Genome Biol. 2017. PMID: 29151363 Free PMC article.

5

Constructing eRNA-mediated gene regulatory networks to explore the genetic basis of muscle and fat-relevant traits in pigs.

Wang C, Chen C, Lei B, Qin S, Zhang Y, Li K, Zhang S, Liu Y. Wang C, et al. Among authors: liu y. Genet Sel Evol. 2024 Apr 9;56(1):28. doi: 10.1186/s12711-024-00897-4. Genet Sel Evol. 2024. PMID: 38594607 Free PMC article.

6

A Statistical Framework for Mapping Risk Genes from De Novo Mutations in Whole-Genome-Sequencing Studies.

Liu Y, Liang Y, Cicek AE, Li Z, Li J, Muhle RA, Krenzer M, Mei Y, Wang Y, Knoblauch N, Morrison J, Zhao S, Jiang Y, Geller E, Ionita-Laza I, Wu J, Xia K, Noonan JP, Sun ZS, He X. Liu Y, et al. Am J Hum Genet. 2018 Jun 7;102(6):1031-1047. doi: 10.1016/j.ajhg.2018.03.023. Epub 2018 May 10. Am J Hum Genet. 2018. PMID: 29754769 Free PMC article.

7

Detailed modeling of positive selection improves detection of cancer driver genes.

Zhao S, Liu J, Nanga P, Liu Y, Cicek AE, Knoblauch N, He C, Stephens M, He X. Zhao S, et al. Among authors: liu j, liu y. Nat Commun. 2019 Jul 30;10(1):3399. doi: 10.1038/s41467-019-11284-9. Nat Commun. 2019. PMID: 31363082 Free PMC article.

8

An analytical framework for whole-genome sequence association studies and its implications for autism spectrum disorder.

Werling DM, Brand H, An JY, Stone MR, Zhu L, Glessner JT, Collins RL, Dong S, Layer RM, Markenscoff-Papadimitriou E, Farrell A, Schwartz GB, Wang HZ, Currall BB, Zhao X, Dea J, Duhn C, Erdman CA, Gilson MC, Yadav R, Handsaker RE, Kashin S, Klei L, Mandell JD, Nowakowski TJ, Liu Y, Pochareddy S, Smith L, Walker MF, Waterman MJ, He X, Kriegstein AR, Rubenstein JL, Sestan N, McCarroll SA, Neale BM, Coon H, Willsey AJ, Buxbaum JD, Daly MJ, State MW, Quinlan AR, Marth GT, Roeder K, Devlin B, Talkowski ME, Sanders SJ. Werling DM, et al. Among authors: liu y. Nat Genet. 2018 Apr 26;50(5):727-736. doi: 10.1038/s41588-018-0107-y. Nat Genet. 2018. PMID: 29700473 Free PMC article.

9

Synbiotic-driven improvement of metabolic disturbances is associated with changes in the gut microbiome in diet-induced obese mice.

Ke X, Walker A, Haange SB, Lagkouvardos I, Liu Y, Schmitt-Kopplin P, von Bergen M, Jehmlich N, He X, Clavel T, Cheung PCK. Ke X, et al. Among authors: liu y. Mol Metab. 2019 Apr;22:96-109. doi: 10.1016/j.molmet.2019.01.012. Epub 2019 Feb 5. Mol Metab. 2019. PMID: 30792016 Free PMC article.

10

Homologous Design and Three-Dimensional Quantitative Structure-Activity Relationship Study of Acaricidal 2,4-Diphenyloxazolines Containing Different Heteroatoms and Alkyl Chains.

Chen Y, Zhang Y, Xun X, Ma Y, Liu Y, Wang Q. Chen Y, et al. Among authors: liu y. J Agric Food Chem. 2024 May 30. doi: 10.1021/acs.jafc.4c01101. Online ahead of print. J Agric Food Chem. 2024. PMID: 38815265

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