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Regional differences in gene expression and promoter usage in aged human brains.
Pardo LM, Rizzu P, Francescatto M, Vitezic M, Leday GG, Sanchez JS, Khamis A, Takahashi H, van de Berg WD, Medvedeva YA, van de Wiel MA, Daub CO, Carninci P, Heutink P. Pardo LM, et al. Among authors: khamis a. Neurobiol Aging. 2013 Jul;34(7):1825-36. doi: 10.1016/j.neurobiolaging.2013.01.005. Epub 2013 Feb 19. Neurobiol Aging. 2013. PMID: 23428183 Free article.
CpG traffic lights are markers of regulatory regions in human genome.
Lioznova AV, Khamis AM, Artemov AV, Besedina E, Ramensky V, Bajic VB, Kulakovskiy IV, Medvedeva YA. Lioznova AV, et al. Among authors: khamis am. BMC Genomics. 2019 Feb 1;20(1):102. doi: 10.1186/s12864-018-5387-1. BMC Genomics. 2019. PMID: 30709331 Free PMC article.
Effects of cytosine methylation on transcription factor binding sites.
Medvedeva YA, Khamis AM, Kulakovskiy IV, Ba-Alawi W, Bhuyan MS, Kawaji H, Lassmann T, Harbers M, Forrest AR, Bajic VB; FANTOM consortium. Medvedeva YA, et al. Among authors: khamis am. BMC Genomics. 2014 Mar 26;15:119. doi: 10.1186/1471-2164-15-119. BMC Genomics. 2014. PMID: 24669864 Free PMC article.
Distinct profiling of antimicrobial peptide families.
Khamis AM, Essack M, Gao X, Bajic VB. Khamis AM, et al. Bioinformatics. 2015 Mar 15;31(6):849-56. doi: 10.1093/bioinformatics/btu738. Epub 2014 Nov 10. Bioinformatics. 2015. PMID: 25388148 Free PMC article.
Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen.
Menden MP, Wang D, Mason MJ, Szalai B, Bulusu KC, Guan Y, Yu T, Kang J, Jeon M, Wolfinger R, Nguyen T, Zaslavskiy M; AstraZeneca-Sanger Drug Combination DREAM Consortium; Jang IS, Ghazoui Z, Ahsen ME, Vogel R, Neto EC, Norman T, Tang EKY, Garnett MJ, Veroli GYD, Fawell S, Stolovitzky G, Guinney J, Dry JR, Saez-Rodriguez J. Menden MP, et al. Nat Commun. 2019 Jun 17;10(1):2674. doi: 10.1038/s41467-019-09799-2. Nat Commun. 2019. PMID: 31209238 Free PMC article.
Etiologies underlying subtypes of long-standing type 2 diabetes.
Bayoumi R, Farooqi M, Alawadi F, Hassanein M, Osama A, Mukhopadhyay D, Abdul F, Sulaiman F, Dsouza S, Mulla F, Ahmed F, AlSharhan M, Khamis A. Bayoumi R, et al. Among authors: khamis a. PLoS One. 2024 May 28;19(5):e0304036. doi: 10.1371/journal.pone.0304036. eCollection 2024. PLoS One. 2024. PMID: 38805513 Free PMC article.
321 results