Heger A - Search Results

1

Epigenetic conservation at gene regulatory elements revealed by non-methylated DNA profiling in seven vertebrates.

Long HK, Sims D, Heger A, Blackledge NP, Kutter C, Wright ML, Grützner F, Odom DT, Patient R, Ponting CP, Klose RJ. Long HK, et al. Among authors: heger a. Elife. 2013 Feb 26;2:e00348. doi: 10.7554/eLife.00348. Elife. 2013. PMID: 23467541 Free PMC article.

2

Evolutionary rate analyses of orthologs and paralogs from 12 Drosophila genomes.

Heger A, Ponting CP. Heger A, et al. Genome Res. 2007 Dec;17(12):1837-49. doi: 10.1101/gr.6249707. Epub 2007 Nov 7. Genome Res. 2007. PMID: 17989258 Free PMC article.

3

Variable strength of translational selection among 12 Drosophila species.

Heger A, Ponting CP. Heger A, et al. Genetics. 2007 Nov;177(3):1337-48. doi: 10.1534/genetics.107.070466. Genetics. 2007. PMID: 18039870 Free PMC article.

4

Accelerated evolution of PAK3- and PIM1-like kinase gene families in the zebra finch, Taeniopygia guttata.

Kong L, Lovell PV, Heger A, Mello CV, Ponting CP. Kong L, et al. Among authors: heger a. Mol Biol Evol. 2010 Aug;27(8):1923-34. doi: 10.1093/molbev/msq080. Epub 2010 Mar 17. Mol Biol Evol. 2010. PMID: 20237222 Free PMC article.

5

Sequencing depth and coverage: key considerations in genomic analyses.

Sims D, Sudbery I, Ilott NE, Heger A, Ponting CP. Sims D, et al. Among authors: heger a. Nat Rev Genet. 2014 Feb;15(2):121-32. doi: 10.1038/nrg3642. Nat Rev Genet. 2014. PMID: 24434847 Review.

6

Targeting polycomb to pericentric heterochromatin in embryonic stem cells reveals a role for H2AK119u1 in PRC2 recruitment.

Cooper S, Dienstbier M, Hassan R, Schermelleh L, Sharif J, Blackledge NP, De Marco V, Elderkin S, Koseki H, Klose R, Heger A, Brockdorff N. Cooper S, et al. Among authors: heger a. Cell Rep. 2014 Jun 12;7(5):1456-1470. doi: 10.1016/j.celrep.2014.04.012. Epub 2014 May 22. Cell Rep. 2014. PMID: 24857660 Free PMC article.

7

OPTIC: orthologous and paralogous transcripts in clades.

Heger A, Ponting CP. Heger A, et al. Nucleic Acids Res. 2008 Jan;36(Database issue):D267-70. doi: 10.1093/nar/gkm852. Epub 2007 Oct 11. Nucleic Acids Res. 2008. PMID: 17933761 Free PMC article.

8

Population and single-cell genomics reveal the Aire dependency, relief from Polycomb silencing, and distribution of self-antigen expression in thymic epithelia.

Sansom SN, Shikama-Dorn N, Zhanybekova S, Nusspaumer G, Macaulay IC, Deadman ME, Heger A, Ponting CP, Holländer GA. Sansom SN, et al. Among authors: heger a. Genome Res. 2014 Dec;24(12):1918-31. doi: 10.1101/gr.171645.113. Epub 2014 Sep 15. Genome Res. 2014. PMID: 25224068 Free PMC article.

9

Long noncoding RNAs in B-cell development and activation.

Brazão TF, Johnson JS, Müller J, Heger A, Ponting CP, Tybulewicz VL. Brazão TF, et al. Among authors: heger a. Blood. 2016 Aug 18;128(7):e10-9. doi: 10.1182/blood-2015-11-680843. Epub 2016 Jul 5. Blood. 2016. PMID: 27381906 Free PMC article.

10

Accurate estimation of gene evolutionary rates using XRATE, with an application to transmembrane proteins.

Heger A, Ponting CP, Holmes I. Heger A, et al. Mol Biol Evol. 2009 Aug;26(8):1715-21. doi: 10.1093/molbev/msp080. Epub 2009 Apr 20. Mol Biol Evol. 2009. PMID: 19380462

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