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Multilocus tests of Pleistocene refugia and ancient divergence in a pair of Atlantic Forest antbirds (Myrmeciza).
Mol Ecol. 2013 Aug;22(15):3996-4013. doi: 10.1111/mec.12361. Epub 2013 Jun 20.
Mol Ecol. 2013.
PMID: 23786305
Ultraconserved Elements Sequencing as a Low-Cost Source of Complete Mitochondrial Genomes and Microsatellite Markers in Non-Model Amniotes.
Raposo do Amaral F, Neves LG, Resende MF Jr, Mobili F, Miyaki CY, Pellegrino KC, Biondo C.
Raposo do Amaral F, et al.
PLoS One. 2015 Sep 17;10(9):e0138446. doi: 10.1371/journal.pone.0138446. eCollection 2015.
PLoS One. 2015.
PMID: 26379155
Free PMC article.
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The "Atlantis Forest hypothesis" does not explain Atlantic Forest phylogeography.
Raposo do Amaral F, Edwards SV, Pie MR, Jennings WB, Svensson-Coelho M, d'Horta FM, Schmitt CJ, Maldonado-Coelho M.
Raposo do Amaral F, et al.
Proc Natl Acad Sci U S A. 2016 Apr 12;113(15):E2097-8. doi: 10.1073/pnas.1602213113. Epub 2016 Mar 16.
Proc Natl Acad Sci U S A. 2016.
PMID: 26984489
Free PMC article.
No abstract available.
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Rugged relief and climate promote isolation and divergence between two neotropical cold-associated birds.
Raposo do Amaral F, Thom G, Lima-Ribeiro MS, Alvarado-Serrano DF, Montesanti JAC, Pellegrino KCM, Miyaki CY, Hickerson MJ, Maldonado-Coelho M.
Raposo do Amaral F, et al.
Evolution. 2021 Oct;75(10):2371-2387. doi: 10.1111/evo.14318. Epub 2021 Aug 26.
Evolution. 2021.
PMID: 34375460
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Recent chapters of Neotropical history overlooked in phylogeography: Shallow divergence explains phenotype and genotype uncoupling in Antilophia manakins.
Raposo do Amaral F, Maldonado-Coelho M, Aleixo A, Luna LW, Rêgo PSD, Araripe J, Souza TO, Silva WAG, Thom G.
Raposo do Amaral F, et al.
Mol Ecol. 2018 Oct;27(20):4108-4120. doi: 10.1111/mec.14843. Epub 2018 Sep 22.
Mol Ecol. 2018.
PMID: 30129256
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Striking pseudogenization in avian phylogenetics: Numts are large and common in falcons.
Nacer DF, Raposo do Amaral F.
Nacer DF, et al. Among authors: raposo do amaral f.
Mol Phylogenet Evol. 2017 Oct;115:1-6. doi: 10.1016/j.ympev.2017.07.002. Epub 2017 Jul 6.
Mol Phylogenet Evol. 2017.
PMID: 28690127
Free article.
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The mitochondrial genome of the sooty swift (Cypseloides fumigatus).
Biancalana RN, Biondo C, Raposo do Amaral F.
Biancalana RN, et al. Among authors: raposo do amaral f.
Mitochondrial DNA B Resour. 2017 Apr 5;2(1):198-200. doi: 10.1080/23802359.2017.1307702.
Mitochondrial DNA B Resour. 2017.
PMID: 33473767
Free PMC article.
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