Tyo K - Search Results

1

Statistical analysis of molecular signal recording.

Glaser JI, Zamft BM, Marblestone AH, Moffitt JR, Tyo K, Boyden ES, Church G, Kording KP. Glaser JI, et al. Among authors: tyo k. PLoS Comput Biol. 2013;9(7):e1003145. doi: 10.1371/journal.pcbi.1003145. Epub 2013 Jul 18. PLoS Comput Biol. 2013. PMID: 23874187 Free PMC article.

2

Coupling chemistry and biology for the synthesis of advanced bioproducts.

Chainani Y, Bonnanzio G, Tyo KE, Broadbelt LJ. Chainani Y, et al. Among authors: tyo ke. Curr Opin Biotechnol. 2023 Dec;84:102992. doi: 10.1016/j.copbio.2023.102992. Epub 2023 Sep 7. Curr Opin Biotechnol. 2023. PMID: 37688985 Review.

3

Meta-omic profiling reveals ubiquity of genes encoding for the nitrogen-rich biopolymer cyanophycin in activated sludge microbiomes.

Farmer M, Rajasabhai R, Tarpeh W, Tyo K, Wells G. Farmer M, et al. Among authors: tyo k. Front Microbiol. 2023 Nov 16;14:1287491. doi: 10.3389/fmicb.2023.1287491. eCollection 2023. Front Microbiol. 2023. PMID: 38033562 Free PMC article.

4

Pickaxe: a Python library for the prediction of novel metabolic reactions.

Shebek KM, Strutz J, Broadbelt LJ, Tyo KEJ. Shebek KM, et al. Among authors: tyo kej. BMC Bioinformatics. 2023 Mar 22;24(1):106. doi: 10.1186/s12859-023-05149-8. BMC Bioinformatics. 2023. PMID: 36949401 Free PMC article.

5

Synthetic biology: emerging methodologies to catalyze the metabolic engineering design cycle.

Smolke CD, Tyo KE. Smolke CD, et al. Metab Eng. 2012 May;14(3):187-8. doi: 10.1016/j.ymben.2012.03.009. Epub 2012 Mar 23. Metab Eng. 2012. PMID: 22465683 No abstract available.

6

Measuring cation dependent DNA polymerase fidelity landscapes by deep sequencing.

Zamft BM, Marblestone AH, Kording K, Schmidt D, Martin-Alarcon D, Tyo K, Boyden ES, Church G. Zamft BM, et al. Among authors: tyo k. PLoS One. 2012;7(8):e43876. doi: 10.1371/journal.pone.0043876. Epub 2012 Aug 22. PLoS One. 2012. PMID: 22928047 Free PMC article.

7

Nucleotide-time alignment for molecular recorders.

Cybulski TR, Boyden ES, Church GM, Tyo KEJ, Kording KP. Cybulski TR, et al. PLoS Comput Biol. 2017 May 1;13(5):e1005483. doi: 10.1371/journal.pcbi.1005483. eCollection 2017 May. PLoS Comput Biol. 2017. PMID: 28459860 Free PMC article.

8

DNA binding strength increases the processivity and activity of a Y-Family DNA polymerase.

Wu J, de Paz A, Zamft BM, Marblestone AH, Boyden ES, Kording KP, Tyo KEJ. Wu J, et al. Sci Rep. 2017 Jul 6;7(1):4756. doi: 10.1038/s41598-017-02578-3. Sci Rep. 2017. PMID: 28684739 Free PMC article.

9

High-resolution mapping of DNA polymerase fidelity using nucleotide imbalances and next-generation sequencing.

de Paz AM, Cybulski TR, Marblestone AH, Zamft BM, Church GM, Boyden ES, Kording KP, Tyo KEJ. de Paz AM, et al. Nucleic Acids Res. 2018 Jul 27;46(13):e78. doi: 10.1093/nar/gky296. Nucleic Acids Res. 2018. PMID: 29718339 Free PMC article.

10

Recording Temporal Signals with Minutes Resolution Using Enzymatic DNA Synthesis.

Bhan N, Callisto A, Strutz J, Glaser J, Kalhor R, Boyden ES, Church G, Kording K, Tyo KEJ. Bhan N, et al. Among authors: tyo kej. J Am Chem Soc. 2021 Oct 13;143(40):16630-16640. doi: 10.1021/jacs.1c07331. Epub 2021 Sep 30. J Am Chem Soc. 2021. PMID: 34591459 Free PMC article.

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