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The impact of sex on gene expression across human tissues.
Oliva M, Muñoz-Aguirre M, Kim-Hellmuth S, Wucher V, Gewirtz ADH, Cotter DJ, Parsana P, Kasela S, Balliu B, Viñuela A, Castel SE, Mohammadi P, Aguet F, Zou Y, Khramtsova EA, Skol AD, Garrido-Martín D, Reverter F, Brown A, Evans P, Gamazon ER, Payne A, Bonazzola R, Barbeira AN, Hamel AR, Martinez-Perez A, Soria JM; GTEx Consortium; Pierce BL, Stephens M, Eskin E, Dermitzakis ET, Segrè AV, Im HK, Engelhardt BE, Ardlie KG, Montgomery SB, Battle AJ, Lappalainen T, Guigó R, Stranger BE. Oliva M, et al. Among authors: engelhardt be. Science. 2020 Sep 11;369(6509):eaba3066. doi: 10.1126/science.aba3066. Science. 2020. PMID: 32913072 Free PMC article.
Computational approaches to fMRI analysis.
Cohen JD, Daw N, Engelhardt B, Hasson U, Li K, Niv Y, Norman KA, Pillow J, Ramadge PJ, Turk-Browne NB, Willke TL. Cohen JD, et al. Nat Neurosci. 2017 Feb 23;20(3):304-313. doi: 10.1038/nn.4499. Nat Neurosci. 2017. PMID: 28230848 Free PMC article. Review.
Brain kernel: A new spatial covariance function for fMRI data.
Wu A, Nastase SA, Baldassano CA, Turk-Browne NB, Norman KA, Engelhardt BE, Pillow JW. Wu A, et al. Among authors: engelhardt be. Neuroimage. 2021 Dec 15;245:118580. doi: 10.1016/j.neuroimage.2021.118580. Epub 2021 Nov 3. Neuroimage. 2021. PMID: 34740792 Free article.
Alignment of spatial genomics data using deep Gaussian processes.
Jones A, Townes FW, Li D, Engelhardt BE. Jones A, et al. Among authors: engelhardt be. Nat Methods. 2023 Sep;20(9):1379-1387. doi: 10.1038/s41592-023-01972-2. Epub 2023 Aug 17. Nat Methods. 2023. PMID: 37592182 Free PMC article.
Optimizing the design of spatial genomic studies.
Jones A, Cai D, Li D, Engelhardt BE. Jones A, et al. Among authors: engelhardt be. bioRxiv [Preprint]. 2023 Jan 31:2023.01.29.526115. doi: 10.1101/2023.01.29.526115. bioRxiv. 2023. PMID: 36778332 Free PMC article. Preprint.
Nonnegative spatial factorization applied to spatial genomics.
Townes FW, Engelhardt BE. Townes FW, et al. Among authors: engelhardt be. Nat Methods. 2023 Feb;20(2):229-238. doi: 10.1038/s41592-022-01687-w. Epub 2022 Dec 31. Nat Methods. 2023. PMID: 36587187 Free PMC article.
60 results