Fang Z - Search Results

1

Inferring the expression variability of human transposable element-derived exons by linear model analysis of deep RNA sequencing data.

Zhang W, Edwards A, Fan W, Fang Z, Deininger P, Zhang K. Zhang W, et al. Among authors: fang z. BMC Genomics. 2013 Aug 28;14:584. doi: 10.1186/1471-2164-14-584. BMC Genomics. 2013. PMID: 23984937 Free PMC article.

2

Rnnotator: an automated de novo transcriptome assembly pipeline from stranded RNA-Seq reads.

Martin J, Bruno VM, Fang Z, Meng X, Blow M, Zhang T, Sherlock G, Snyder M, Wang Z. Martin J, et al. Among authors: fang z. BMC Genomics. 2010 Nov 24;11:663. doi: 10.1186/1471-2164-11-663. BMC Genomics. 2010. PMID: 21106091 Free PMC article.

3

PAIR: paired allelic log-intensity-ratio-based normalization method for SNP-CGH arrays.

Yang S, Pounds S, Zhang K, Fang Z. Yang S, et al. Among authors: fang z. Bioinformatics. 2013 Feb 1;29(3):299-307. doi: 10.1093/bioinformatics/bts683. Epub 2012 Nov 29. Bioinformatics. 2013. PMID: 23196989 Free PMC article.

4

The sequence structures of human microRNA molecules and their implications.

Fang Z, Du R, Edwards A, Flemington EK, Zhang K. Fang Z, et al. PLoS One. 2013;8(1):e54215. doi: 10.1371/journal.pone.0054215. Epub 2013 Jan 18. PLoS One. 2013. PMID: 23349828 Free PMC article.

5

Integrative Genomics and Transcriptomics Analysis Reveals Potential Mechanisms for Favorable Prognosis of Patients with HPV-Positive Head and Neck Carcinomas.

Zhang W, Edwards A, Fang Z, Flemington EK, Zhang K. Zhang W, et al. Among authors: fang z. Sci Rep. 2016 Apr 25;6:24927. doi: 10.1038/srep24927. Sci Rep. 2016. PMID: 27108969 Free PMC article.

6

An Integrated Approach for RNA-seq Data Normalization.

Yang S, Mercante DE, Zhang K, Fang Z. Yang S, et al. Among authors: fang z. Cancer Inform. 2016 Jun 27;15:129-41. doi: 10.4137/CIN.S39781. eCollection 2016. Cancer Inform. 2016. PMID: 27385909 Free PMC article.

7

CSTG: An Effective Framework for Cost-sensitive Sparse Online Learning.

Chen Z, Fang Z, Fan W, Edwards A, Zhang K. Chen Z, et al. Among authors: fang z. SIAM Rev Soc Ind Appl Math. 2017 Apr;2017:759-767. doi: 10.1137/1.9781611974973.85. SIAM Rev Soc Ind Appl Math. 2017. PMID: 29861512 Free PMC article.

8

Adaptive Robust Local Online Density Estimation for Streaming Data.

Chen Z, Fang Z, Sheng V, Zhao J, Fan W, Edwards A, Zhang K. Chen Z, et al. Among authors: fang z. Int J Mach Learn Cybern. 2021 Jun;12(6):1803-1824. doi: 10.1007/s13042-021-01275-y. Epub 2021 Feb 3. Int J Mach Learn Cybern. 2021. PMID: 34149955 Free PMC article.

9

Robust RNA-seq data analysis using an integrated method of ROC curve and Kolmogorov-Smirnov test.

Yang S, Zhang K, Fang Z. Yang S, et al. Among authors: fang z. Commun Stat Simul Comput. 2022;51(12):7444-7457. doi: 10.1080/03610918.2020.1837165. Epub 2020 Oct 25. Commun Stat Simul Comput. 2022. PMID: 36583130 Free PMC article.

10

Design and validation issues in RNA-seq experiments.

Fang Z, Cui X. Fang Z, et al. Brief Bioinform. 2011 May;12(3):280-7. doi: 10.1093/bib/bbr004. Epub 2011 Apr 15. Brief Bioinform. 2011. PMID: 21498551 Review.

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