Kowalczyk A - Search Results

1

Massively-parallel sequencing assists the diagnosis and guided treatment of cancers of unknown primary.

Tothill RW, Li J, Mileshkin L, Doig K, Siganakis T, Cowin P, Fellowes A, Semple T, Fox S, Byron K, Kowalczyk A, Thomas D, Schofield P, Bowtell DD. Tothill RW, et al. Among authors: kowalczyk a. J Pathol. 2013 Dec;231(4):413-23. doi: 10.1002/path.4251. J Pathol. 2013. PMID: 24037760

2

Development and validation of a gene expression tumour classifier for cancer of unknown primary.

Tothill RW, Shi F, Paiman L, Bedo J, Kowalczyk A, Mileshkin L, Buela E, Klupacs R, Bowtell D, Byron K. Tothill RW, et al. Among authors: kowalczyk a. Pathology. 2015 Jan;47(1):7-12. doi: 10.1097/PAT.0000000000000194. Pathology. 2015. PMID: 25485653

3

An expression-based site of origin diagnostic method designed for clinical application to cancer of unknown origin.

Tothill RW, Kowalczyk A, Rischin D, Bousioutas A, Haviv I, van Laar RK, Waring PM, Zalcberg J, Ward R, Biankin AV, Sutherland RL, Henshall SM, Fong K, Pollack JR, Bowtell DD, Holloway AJ. Tothill RW, et al. Among authors: kowalczyk a. Cancer Res. 2005 May 15;65(10):4031-40. doi: 10.1158/0008-5472.CAN-04-3617. Cancer Res. 2005. PMID: 15899792

4

A signature predicting poor prognosis in gastric and ovarian cancer represents a coordinated macrophage and stromal response.

Busuttil RA, George J, Tothill RW, Ioculano K, Kowalczyk A, Mitchell C, Lade S, Tan P, Haviv I, Boussioutas A. Busuttil RA, et al. Among authors: kowalczyk a. Clin Cancer Res. 2014 May 15;20(10):2761-72. doi: 10.1158/1078-0432.CCR-13-3049. Epub 2014 Mar 21. Clin Cancer Res. 2014. PMID: 24658156

5

Genome-wide analysis distinguishes hyperglycemia regulated epigenetic signatures of primary vascular cells.

Pirola L, Balcerczyk A, Tothill RW, Haviv I, Kaspi A, Lunke S, Ziemann M, Karagiannis T, Tonna S, Kowalczyk A, Beresford-Smith B, Macintyre G, Kelong M, Hongyu Z, Zhu J, El-Osta A. Pirola L, et al. Among authors: kowalczyk a. Genome Res. 2011 Oct;21(10):1601-15. doi: 10.1101/gr.116095.110. Epub 2011 Sep 2. Genome Res. 2011. PMID: 21890681 Free PMC article.

6

Prediction of breast cancer prognosis using gene set statistics provides signature stability and biological context.

Abraham G, Kowalczyk A, Loi S, Haviv I, Zobel J. Abraham G, et al. Among authors: kowalczyk a. BMC Bioinformatics. 2010 May 25;11:277. doi: 10.1186/1471-2105-11-277. BMC Bioinformatics. 2010. PMID: 20500821 Free PMC article.

7

Pretreatment gene expression profiles can be used to predict response to neoadjuvant chemoradiotherapy in esophageal cancer.

Duong C, Greenawalt DM, Kowalczyk A, Ciavarella ML, Raskutti G, Murray WK, Phillips WA, Thomas RJ. Duong C, et al. Among authors: kowalczyk a. Ann Surg Oncol. 2007 Dec;14(12):3602-9. doi: 10.1245/s10434-007-9550-1. Epub 2007 Sep 26. Ann Surg Oncol. 2007. PMID: 17896157

8

FSR: feature set reduction for scalable and accurate multi-class cancer subtype classification based on copy number.

Wong G, Leckie C, Kowalczyk A. Wong G, et al. Among authors: kowalczyk a. Bioinformatics. 2012 Jan 15;28(2):151-9. doi: 10.1093/bioinformatics/btr644. Epub 2011 Nov 21. Bioinformatics. 2012. PMID: 22110244

9

Curated microRNAs in urine and blood fail to validate as predictive biomarkers for high-risk prostate cancer.

Sapre N, Hong MK, Macintyre G, Lewis H, Kowalczyk A, Costello AJ, Corcoran NM, Hovens CM. Sapre N, et al. Among authors: kowalczyk a. PLoS One. 2014 Apr 4;9(4):e91729. doi: 10.1371/journal.pone.0091729. eCollection 2014. PLoS One. 2014. PMID: 24705338 Free PMC article.

10

Exploiting sequence similarity to validate the sensitivity of SNP arrays in detecting fine-scaled copy number variations.

Wong G, Leckie C, Gorringe KL, Haviv I, Campbell IG, Kowalczyk A. Wong G, et al. Among authors: kowalczyk a. Bioinformatics. 2010 Apr 15;26(8):1007-14. doi: 10.1093/bioinformatics/btq088. Epub 2010 Feb 25. Bioinformatics. 2010. PMID: 20189937

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