Spicer V - Search Results

1

Thermoanaerobacter thermohydrosulfuricus WC1 shows protein complement stability during fermentation of key lignocellulose-derived substrates.

Verbeke TJ, Spicer V, Krokhin OV, Zhang X, Schellenberg JJ, Fristensky B, Wilkins JA, Levin DB, Sparling R. Verbeke TJ, et al. Among authors: spicer v. Appl Environ Microbiol. 2014 Mar;80(5):1602-15. doi: 10.1128/AEM.03555-13. Epub 2013 Dec 20. Appl Environ Microbiol. 2014. PMID: 24362431 Free PMC article.

2

An improved model for prediction of retention times of tryptic peptides in ion pair reversed-phase HPLC: its application to protein peptide mapping by off-line HPLC-MALDI MS.

Krokhin OV, Craig R, Spicer V, Ens W, Standing KG, Beavis RC, Wilkins JA. Krokhin OV, et al. Among authors: spicer v. Mol Cell Proteomics. 2004 Sep;3(9):908-19. doi: 10.1074/mcp.M400031-MCP200. Epub 2004 Jul 6. Mol Cell Proteomics. 2004. PMID: 15238601 Free article.

3

Sequence-specific retention calculator. A family of peptide retention time prediction algorithms in reversed-phase HPLC: applicability to various chromatographic conditions and columns.

Spicer V, Yamchuk A, Cortens J, Sousa S, Ens W, Standing KG, Wilkins JA, Krokhin OV. Spicer V, et al. Anal Chem. 2007 Nov 15;79(22):8762-8. doi: 10.1021/ac071474k. Epub 2007 Oct 16. Anal Chem. 2007. PMID: 17939646

4

Practical implementation of 2D HPLC scheme with accurate peptide retention prediction in both dimensions for high-throughput bottom-up proteomics.

Dwivedi RC, Spicer V, Harder M, Antonovici M, Ens W, Standing KG, Wilkins JA, Krokhin OV. Dwivedi RC, et al. Among authors: spicer v. Anal Chem. 2008 Sep 15;80(18):7036-42. doi: 10.1021/ac800984n. Epub 2008 Aug 8. Anal Chem. 2008. PMID: 18686972

5

Peptide retention standards and hydrophobicity indexes in reversed-phase high-performance liquid chromatography of peptides.

Krokhin OV, Spicer V. Krokhin OV, et al. Among authors: spicer v. Anal Chem. 2009 Nov 15;81(22):9522-30. doi: 10.1021/ac9016693. Anal Chem. 2009. PMID: 19848410

6

A model for predicting slopes S in the basic equation for the linear-solvent-strength theory of peptide separation by reversed-phase high-performance liquid chromatography.

Vu H, Spicer V, Gotfrid A, Krokhin OV. Vu H, et al. Among authors: spicer v. J Chromatogr A. 2010 Jan 22;1217(4):489-97. doi: 10.1016/j.chroma.2009.11.065. Epub 2009 Nov 27. J Chromatogr A. 2010. PMID: 20004401

7

Predicting peptide retention times for proteomics.

Krokhin OV, Spicer V. Krokhin OV, et al. Among authors: spicer v. Curr Protoc Bioinformatics. 2010 Sep;Chapter 13:Unit 13.14. doi: 10.1002/0471250953.bi1314s31. Curr Protoc Bioinformatics. 2010. PMID: 20836075

8

Predicting retention time shifts associated with variation of the gradient slope in peptide RP-HPLC.

Spicer V, Grigoryan M, Gotfrid A, Standing KG, Krokhin OV. Spicer V, et al. Anal Chem. 2010 Dec 1;82(23):9678-85. doi: 10.1021/ac102228a. Epub 2010 Nov 4. Anal Chem. 2010. PMID: 21049933

The proposed model is based on our findings for a set of synthetic species (Vu, H.; Spicer, V.; Gotfrid, A.; Krokhin, O. V. J. Chromatogr., A, 2010, 1217, 489-497), which postulate that slopes S can be predicted taking into account simultaneously peptide leng …

The proposed model is based on our findings for a set of synthetic species (Vu, H.; Spicer, V.; Gotfrid, A.; Krokhin, O. V …

9

Effect of cyclization of N-terminal glutamine and carbamidomethyl-cysteine (residues) on the chromatographic behavior of peptides in reversed-phase chromatography.

Reimer J, Shamshurin D, Harder M, Yamchuk A, Spicer V, Krokhin OV. Reimer J, et al. Among authors: spicer v. J Chromatogr A. 2011 Aug 5;1218(31):5101-7. doi: 10.1016/j.chroma.2011.05.079. Epub 2011 May 27. J Chromatogr A. 2011. PMID: 21665210

10

Defining intrinsic hydrophobicity of amino acids' side chains in random coil conformation. Reversed-phase liquid chromatography of designed synthetic peptides vs. random peptide data sets.

Shamshurin D, Spicer V, Krokhin OV. Shamshurin D, et al. Among authors: spicer v. J Chromatogr A. 2011 Sep 16;1218(37):6348-55. doi: 10.1016/j.chroma.2011.06.092. Epub 2011 Jul 3. J Chromatogr A. 2011. PMID: 21798546

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