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Benchmarking of methods for genomic taxonomy.
Larsen MV, Cosentino S, Lukjancenko O, Saputra D, Rasmussen S, Hasman H, Sicheritz-Pontén T, Aarestrup FM, Ussery DW, Lund O. Larsen MV, et al. Among authors: lukjancenko o. J Clin Microbiol. 2014 May;52(5):1529-39. doi: 10.1128/JCM.02981-13. Epub 2014 Feb 26. J Clin Microbiol. 2014. PMID: 24574292 Free PMC article.
Comparison of 61 sequenced Escherichia coli genomes.
Lukjancenko O, Wassenaar TM, Ussery DW. Lukjancenko O, et al. Microb Ecol. 2010 Nov;60(4):708-20. doi: 10.1007/s00248-010-9717-3. Epub 2010 Jul 11. Microb Ecol. 2010. PMID: 20623278 Free PMC article. Review.
Vibrio chromosome-specific families.
Lukjancenko O, Ussery DW. Lukjancenko O, et al. Front Microbiol. 2014 Mar 18;5:73. doi: 10.3389/fmicb.2014.00073. eCollection 2014. Front Microbiol. 2014. PMID: 24672511 Free PMC article.
Veillonella, Firmicutes: Microbes disguised as Gram negatives.
Vesth T, Ozen A, Andersen SC, Kaas RS, Lukjancenko O, Bohlin J, Nookaew I, Wassenaar TM, Ussery DW. Vesth T, et al. Among authors: lukjancenko o. Stand Genomic Sci. 2013 Dec 15;9(2):431-48. doi: 10.4056/sigs.2981345. eCollection 2013 Dec 20. Stand Genomic Sci. 2013. PMID: 24976898 Free PMC article.
Genomic signature of multidrug-resistant Salmonella enterica serovar typhi isolates related to a massive outbreak in Zambia between 2010 and 2012.
Hendriksen RS, Leekitcharoenphon P, Lukjancenko O, Lukwesa-Musyani C, Tambatamba B, Mwaba J, Kalonda A, Nakazwe R, Kwenda G, Jensen JD, Svendsen CA, Dittmann KK, Kaas RS, Cavaco LM, Aarestrup FM, Hasman H, Mwansa JC. Hendriksen RS, et al. Among authors: lukjancenko o. J Clin Microbiol. 2015 Jan;53(1):262-72. doi: 10.1128/JCM.02026-14. Epub 2014 Nov 12. J Clin Microbiol. 2015. PMID: 25392358 Free PMC article.
Quality scores for 32,000 genomes.
Land ML, Hyatt D, Jun SR, Kora GH, Hauser LJ, Lukjancenko O, Ussery DW. Land ML, et al. Among authors: lukjancenko o. Stand Genomic Sci. 2014 Dec 8;9:20. doi: 10.1186/1944-3277-9-20. eCollection 2014. Stand Genomic Sci. 2014. PMID: 25780509 Free PMC article.
Whole genome sequencing as a tool for phylogenetic analysis of clinical strains of Mitis group streptococci.
Rasmussen LH, Dargis R, Højholt K, Christensen JJ, Skovgaard O, Justesen US, Rosenvinge FS, Moser C, Lukjancenko O, Rasmussen S, Nielsen XC. Rasmussen LH, et al. Among authors: lukjancenko o. Eur J Clin Microbiol Infect Dis. 2016 Oct;35(10):1615-25. doi: 10.1007/s10096-016-2700-2. Epub 2016 Jun 20. Eur J Clin Microbiol Infect Dis. 2016. PMID: 27325438
35 results