Levitt M - Search Results

1

Redundancy-weighting for better inference of protein structural features.

Yanover C, Vanetik N, Levitt M, Kolodny R, Keasar C. Yanover C, et al. Among authors: levitt m. Bioinformatics. 2014 Aug 15;30(16):2295-301. doi: 10.1093/bioinformatics/btu242. Epub 2014 Apr 25. Bioinformatics. 2014. PMID: 24771517 Free PMC article.

2

Recognizing native folds by the arrangement of hydrophobic and polar residues.

Huang ES, Subbiah S, Levitt M. Huang ES, et al. Among authors: levitt m. J Mol Biol. 1995 Oct 6;252(5):709-20. doi: 10.1006/jmbi.1995.0529. J Mol Biol. 1995. PMID: 7563083 Free article.

3

Expectations from structural genomics.

Brenner SE, Levitt M. Brenner SE, et al. Among authors: levitt m. Protein Sci. 2000 Jan;9(1):197-200. doi: 10.1110/ps.9.1.197. Protein Sci. 2000. PMID: 10739263 Free PMC article.

4

Small libraries of protein fragments model native protein structures accurately.

Kolodny R, Koehl P, Guibas L, Levitt M. Kolodny R, et al. Among authors: levitt m. J Mol Biol. 2002 Oct 18;323(2):297-307. doi: 10.1016/s0022-2836(02)00942-7. J Mol Biol. 2002. PMID: 12381322

5

Protein decoy assembly using short fragments under geometric constraints.

Kolodny R, Levitt M. Kolodny R, et al. Among authors: levitt m. Biopolymers. 2003 Mar;68(3):278-85. doi: 10.1002/bip.10262. Biopolymers. 2003. PMID: 12601789

6

A novel approach to decoy set generation: designing a physical energy function having local minima with native structure characteristics.

Keasar C, Levitt M. Keasar C, et al. Among authors: levitt m. J Mol Biol. 2003 May 23;329(1):159-74. doi: 10.1016/s0022-2836(03)00323-1. J Mol Biol. 2003. PMID: 12742025 Free PMC article.

7

Comprehensive evaluation of protein structure alignment methods: scoring by geometric measures.

Kolodny R, Koehl P, Levitt M. Kolodny R, et al. Among authors: levitt m. J Mol Biol. 2005 Mar 4;346(4):1173-88. doi: 10.1016/j.jmb.2004.12.032. Epub 2005 Jan 16. J Mol Biol. 2005. PMID: 15701525 Free PMC article.

8

Near-native structure refinement using in vacuo energy minimization.

Summa CM, Levitt M. Summa CM, et al. Among authors: levitt m. Proc Natl Acad Sci U S A. 2007 Feb 27;104(9):3177-82. doi: 10.1073/pnas.0611593104. Epub 2007 Feb 20. Proc Natl Acad Sci U S A. 2007. PMID: 17360625 Free PMC article.

9

Growth of novel protein structural data.

Levitt M. Levitt M. Proc Natl Acad Sci U S A. 2007 Feb 27;104(9):3183-8. doi: 10.1073/pnas.0611678104. Epub 2007 Feb 20. Proc Natl Acad Sci U S A. 2007. PMID: 17360626 Free PMC article.

10

Solvent dramatically affects protein structure refinement.

Chopra G, Summa CM, Levitt M. Chopra G, et al. Among authors: levitt m. Proc Natl Acad Sci U S A. 2008 Dec 23;105(51):20239-44. doi: 10.1073/pnas.0810818105. Epub 2008 Dec 10. Proc Natl Acad Sci U S A. 2008. PMID: 19073921 Free PMC article.

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