Parikh JR - Search Results

1

Alternative splicing of MBD2 supports self-renewal in human pluripotent stem cells.

Lu Y, Loh YH, Li H, Cesana M, Ficarro SB, Parikh JR, Salomonis N, Toh CX, Andreadis ST, Luckey CJ, Collins JJ, Daley GQ, Marto JA. Lu Y, et al. Among authors: parikh jr. Cell Stem Cell. 2014 Jul 3;15(1):92-101. doi: 10.1016/j.stem.2014.04.002. Epub 2014 May 8. Cell Stem Cell. 2014. PMID: 24813856 Free PMC article.

2

Niobium(V) oxide (Nb2O5): application to phosphoproteomics.

Ficarro SB, Parikh JR, Blank NC, Marto JA. Ficarro SB, et al. Among authors: parikh jr. Anal Chem. 2008 Jun 15;80(12):4606-13. doi: 10.1021/ac800564h. Epub 2008 May 21. Anal Chem. 2008. PMID: 18491922

3

Discovering causal signaling pathways through gene-expression patterns.

Parikh JR, Klinger B, Xia Y, Marto JA, Blüthgen N. Parikh JR, et al. Nucleic Acids Res. 2010 Jul;38(Web Server issue):W109-17. doi: 10.1093/nar/gkq424. Epub 2010 May 21. Nucleic Acids Res. 2010. PMID: 20494976 Free PMC article.

4

Mass spectrometry-based proteomics: qualitative identification to activity-based protein profiling.

Cardoza JD, Parikh JR, Ficarro SB, Marto JA. Cardoza JD, et al. Among authors: parikh jr. Wiley Interdiscip Rev Syst Biol Med. 2012 Mar-Apr;4(2):141-62. doi: 10.1002/wsbm.166. Epub 2012 Jan 9. Wiley Interdiscip Rev Syst Biol Med. 2012. PMID: 22231900 Free PMC article. Review.

5

Multi-edge gene set networks reveal novel insights into global relationships between biological themes.

Parikh JR, Xia Y, Marto JA. Parikh JR, et al. PLoS One. 2012;7(9):e45211. doi: 10.1371/journal.pone.0045211. Epub 2012 Sep 13. PLoS One. 2012. PMID: 23028852 Free PMC article.

6

multiplierz: an extensible API based desktop environment for proteomics data analysis.

Parikh JR, Askenazi M, Ficarro SB, Cashorali T, Webber JT, Blank NC, Zhang Y, Marto JA. Parikh JR, et al. BMC Bioinformatics. 2009 Oct 29;10:364. doi: 10.1186/1471-2105-10-364. BMC Bioinformatics. 2009. PMID: 19874609 Free PMC article.

7

mzAPI: a new strategy for efficiently sharing mass spectrometry data.

Askenazi M, Parikh JR, Marto JA. Askenazi M, et al. Among authors: parikh jr. Nat Methods. 2009 Apr;6(4):240-1. doi: 10.1038/nmeth0409-240. Nat Methods. 2009. PMID: 19333238 Free PMC article. No abstract available.

8

Production of a reference transcriptome and transcriptomic database (PocilloporaBase) for the cauliflower coral, Pocillopora damicornis.

Traylor-Knowles N, Granger BR, Lubinski TJ, Parikh JR, Garamszegi S, Xia Y, Marto JA, Kaufman L, Finnerty JR. Traylor-Knowles N, et al. Among authors: parikh jr. BMC Genomics. 2011 Nov 29;12:585. doi: 10.1186/1471-2164-12-585. BMC Genomics. 2011. PMID: 22126435 Free PMC article.

9

A data-driven architecture using natural language processing to improve phenotyping efficiency and accelerate genetic diagnoses of rare disorders.

Parikh JR, Genetti CA, Aykanat A, Brownstein CA, Schmitz-Abe K, Danowski M, Quitadomo A, Madden JA, Yacoubian C, Gain R, Williams T, Meskell M, Brown A, Frith A, Rockowitz S, Sliz P, Agrawal PB, Defay T, McDonagh P, Reynders J, Lefebvre S, Beggs AH. Parikh JR, et al. HGG Adv. 2021 Jul;2(3):100035. doi: 10.1016/j.xhgg.2021.100035. Epub 2021 May 11. HGG Adv. 2021. PMID: 34514437 Free PMC article.

10

Response to Letter to the Editor, Task of Leadership.

Baird GL, Mainiero MB, Bernstein MH, Parikh JR. Baird GL, et al. Among authors: parikh jr. J Am Coll Radiol. 2024 May 6:S1546-1440(24)00420-4. doi: 10.1016/j.jacr.2024.04.012. Online ahead of print. J Am Coll Radiol. 2024. PMID: 38719098 No abstract available.

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