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The jPOST environment: an integrated proteomics data repository and database.
Moriya Y, Kawano S, Okuda S, Watanabe Y, Matsumoto M, Takami T, Kobayashi D, Yamanouchi Y, Araki N, Yoshizawa AC, Tabata T, Iwasaki M, Sugiyama N, Tanaka S, Goto S, Ishihama Y. Moriya Y, et al. Among authors: araki n. Nucleic Acids Res. 2019 Jan 8;47(D1):D1218-D1224. doi: 10.1093/nar/gky899. Nucleic Acids Res. 2019. PMID: 30295851 Free PMC article.
jPOSTrepo: an international standard data repository for proteomes.
Okuda S, Watanabe Y, Moriya Y, Kawano S, Yamamoto T, Matsumoto M, Takami T, Kobayashi D, Araki N, Yoshizawa AC, Tabata T, Sugiyama N, Goto S, Ishihama Y. Okuda S, et al. Among authors: araki n. Nucleic Acids Res. 2017 Jan 4;45(D1):D1107-D1111. doi: 10.1093/nar/gkw1080. Epub 2016 Nov 28. Nucleic Acids Res. 2017. PMID: 27899654 Free PMC article.
Integrated proteomics identified novel activation of dynein IC2-GR-COX-1 signaling in neurofibromatosis type I (NF1) disease model cells.
Hirayama M, Kobayashi D, Mizuguchi S, Morikawa T, Nagayama M, Midorikawa U, Wilson MM, Nambu AN, Yoshizawa AC, Kawano S, Araki N. Hirayama M, et al. Among authors: araki n. Mol Cell Proteomics. 2013 May;12(5):1377-94. doi: 10.1074/mcp.M112.024802. Epub 2013 Jan 28. Mol Cell Proteomics. 2013. PMID: 23358504 Free PMC article.
Integrated view of the human chromosome X-centric proteome project.
Yamamoto T, Nakayama K, Hirano H, Tomonaga T, Ishihama Y, Yamada T, Kondo T, Kodera Y, Sato Y, Araki N, Mamitsuka H, Goshima N. Yamamoto T, et al. Among authors: araki n. J Proteome Res. 2013 Jan 4;12(1):58-61. doi: 10.1021/pr300844p. Epub 2012 Dec 21. J Proteome Res. 2013. PMID: 23259409
Neurofibromatosis type 1 (NF1) tumor suppressor, neurofibromin, regulates the neuronal differentiation of PC12 cells via its associating protein, CRMP-2.
Patrakitkomjorn S, Kobayashi D, Morikawa T, Wilson MM, Tsubota N, Irie A, Ozawa T, Aoki M, Arimura N, Kaibuchi K, Saya H, Araki N. Patrakitkomjorn S, et al. Among authors: araki n. J Biol Chem. 2008 Apr 4;283(14):9399-413. doi: 10.1074/jbc.M708206200. Epub 2008 Jan 23. J Biol Chem. 2008. PMID: 18218617 Free article.
Identification of a Specific Translational Machinery via TCTP-EF1A2 Interaction Regulating NF1-associated Tumor Growth by Affinity Purification and Data-independent Mass Spectrometry Acquisition (AP-DIA).
Kobayashi D, Tokuda T, Sato K, Okanishi H, Nagayama M, Hirayama-Kurogi M, Ohtsuki S, Araki N. Kobayashi D, et al. Among authors: araki n. Mol Cell Proteomics. 2019 Feb;18(2):245-262. doi: 10.1074/mcp.RA118.001014. Epub 2018 Oct 31. Mol Cell Proteomics. 2019. PMID: 30381327 Free PMC article.
Glioma initiating cells form a differentiation niche via the induction of extracellular matrices and integrin αV.
Niibori-Nambu A, Midorikawa U, Mizuguchi S, Hide T, Nagai M, Komohara Y, Nagayama M, Hirayama M, Kobayashi D, Tsubota N, Takezaki T, Makino K, Nakamura H, Takeya M, Kuratsu J, Araki N. Niibori-Nambu A, et al. Among authors: araki n. PLoS One. 2013 May 21;8(5):e59558. doi: 10.1371/journal.pone.0059558. Print 2013. PLoS One. 2013. PMID: 23704872 Free PMC article.
717 results