Chen JY - Search Results

1

Evidence for deep regulatory similarities in early developmental programs across highly diverged insects.

Kazemian M, Suryamohan K, Chen JY, Zhang Y, Samee MA, Halfon MS, Sinha S. Kazemian M, et al. Among authors: chen jy. Genome Biol Evol. 2014 Sep;6(9):2301-20. doi: 10.1093/gbe/evu184. Genome Biol Evol. 2014. PMID: 25173756 Free PMC article.

2

Evolutionary interrogation of human biology in well-annotated genomic framework of rhesus macaque.

Zhang SJ, Liu CJ, Yu P, Zhong X, Chen JY, Yang X, Peng J, Yan S, Wang C, Zhu X, Xiong J, Zhang YE, Tan BC, Li CY. Zhang SJ, et al. Among authors: chen jy. Mol Biol Evol. 2014 May;31(5):1309-24. doi: 10.1093/molbev/msu084. Epub 2014 Feb 27. Mol Biol Evol. 2014. PMID: 24577841 Free PMC article.

3

Evolutionarily significant A-to-I RNA editing events originated through G-to-A mutations in primates.

An NA, Ding W, Yang XZ, Peng J, He BZ, Shen QS, Lu F, He A, Zhang YE, Tan BC, Chen JY, Li CY. An NA, et al. Among authors: chen jy. Genome Biol. 2019 Feb 4;20(1):24. doi: 10.1186/s13059-019-1638-y. Genome Biol. 2019. PMID: 30712515 Free PMC article.

4

De novo genes with an lncRNA origin encode unique human brain developmental functionality.

An NA, Zhang J, Mo F, Luan X, Tian L, Shen QS, Li X, Li C, Zhou F, Zhang B, Ji M, Qi J, Zhou WZ, Ding W, Chen JY, Yu J, Zhang L, Shu S, Hu B, Li CY. An NA, et al. Among authors: chen jy. Nat Ecol Evol. 2023 Feb;7(2):264-278. doi: 10.1038/s41559-022-01925-6. Epub 2023 Jan 2. Nat Ecol Evol. 2023. PMID: 36593289 Free PMC article.

5

RhesusBase PopGateway: Genome-Wide Population Genetics Atlas in Rhesus Macaque.

Zhong X, Peng J, Shen QS, Chen JY, Gao H, Luan X, Yan S, Huang X, Zhang SJ, Xu L, Zhang X, Tan BC, Li CY. Zhong X, et al. Among authors: chen jy. Mol Biol Evol. 2016 May;33(5):1370-5. doi: 10.1093/molbev/msw025. Epub 2016 Feb 16. Mol Biol Evol. 2016. PMID: 26882984 Free PMC article.

6

Isoform Evolution in Primates through Independent Combination of Alternative RNA Processing Events.

Zhang SJ, Wang C, Yan S, Fu A, Luan X, Li Y, Sunny Shen Q, Zhong X, Chen JY, Wang X, Chin-Ming Tan B, He A, Li CY. Zhang SJ, et al. Among authors: chen jy. Mol Biol Evol. 2017 Oct 1;34(10):2453-2468. doi: 10.1093/molbev/msx212. Mol Biol Evol. 2017. PMID: 28957512 Free PMC article.

7

A large-scale binding and functional map of human RNA-binding proteins.

Van Nostrand EL, Freese P, Pratt GA, Wang X, Wei X, Xiao R, Blue SM, Chen JY, Cody NAL, Dominguez D, Olson S, Sundararaman B, Zhan L, Bazile C, Bouvrette LPB, Bergalet J, Duff MO, Garcia KE, Gelboin-Burkhart C, Hochman M, Lambert NJ, Li H, McGurk MP, Nguyen TB, Palden T, Rabano I, Sathe S, Stanton R, Su A, Wang R, Yee BA, Zhou B, Louie AL, Aigner S, Fu XD, Lécuyer E, Burge CB, Graveley BR, Yeo GW. Van Nostrand EL, et al. Among authors: chen jy. Nature. 2020 Jul;583(7818):711-719. doi: 10.1038/s41586-020-2077-3. Epub 2020 Jul 29. Nature. 2020. PMID: 32728246 Free PMC article.

8

Hominoid-specific de novo protein-coding genes originating from long non-coding RNAs.

Xie C, Zhang YE, Chen JY, Liu CJ, Zhou WZ, Li Y, Zhang M, Zhang R, Wei L, Li CY. Xie C, et al. Among authors: chen jy. PLoS Genet. 2012 Sep;8(9):e1002942. doi: 10.1371/journal.pgen.1002942. Epub 2012 Sep 13. PLoS Genet. 2012. PMID: 23028352 Free PMC article.

9

Active retrotransposons help maintain pericentromeric heterochromatin required for faithful cell division.

Hao Y, Wang D, Wu S, Li X, Shao C, Zhang P, Chen JY, Lim DH, Fu XD, Chen R, He S. Hao Y, et al. Among authors: chen jy, chen r. Genome Res. 2020 Nov;30(11):1570-1582. doi: 10.1101/gr.256131.119. Epub 2020 Oct 15. Genome Res. 2020. PMID: 33060173 Free PMC article.

10

Selectively Constrained RNA Editing Regulation Crosstalks with piRNA Biogenesis in Primates.

Yang XZ, Chen JY, Liu CJ, Peng J, Wee YR, Han X, Wang C, Zhong X, Shen QS, Liu H, Cao H, Chen XW, Tan BC, Li CY. Yang XZ, et al. Among authors: chen jy, chen xw. Mol Biol Evol. 2015 Dec;32(12):3143-57. doi: 10.1093/molbev/msv183. Epub 2015 Sep 3. Mol Biol Evol. 2015. PMID: 26341297 Free PMC article.

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