Haase SB - Search Results

1

Checkpoints couple transcription network oscillator dynamics to cell-cycle progression.

Bristow SL, Leman AR, Simmons Kovacs LA, Deckard A, Harer J, Haase SB. Bristow SL, et al. Among authors: haase sb. Genome Biol. 2014 Sep 5;15(9):446. doi: 10.1186/s13059-014-0446-7. Genome Biol. 2014. PMID: 25200947 Free PMC article.

2

Intrinsic and cyclin-dependent kinase-dependent control of spindle pole body duplication in budding yeast.

Simmons Kovacs LA, Nelson CL, Haase SB. Simmons Kovacs LA, et al. Among authors: haase sb. Mol Biol Cell. 2008 Aug;19(8):3243-53. doi: 10.1091/mbc.e08-02-0148. Epub 2008 May 14. Mol Biol Cell. 2008. PMID: 18480404 Free PMC article.

3

Transcription networks and cyclin/CDKs: the yin and yang of cell cycle oscillators.

Simmons Kovacs LA, Orlando DA, Haase SB. Simmons Kovacs LA, et al. Among authors: haase sb. Cell Cycle. 2008 Sep 1;7(17):2626-9. doi: 10.4161/cc.7.17.6515. Epub 2008 Sep 26. Cell Cycle. 2008. PMID: 18758238 Review.

4

Cohesin: it's not just for chromosomes anymore.

Simmons Kovacs LA, Haase SB. Simmons Kovacs LA, et al. Among authors: haase sb. Cell Cycle. 2010 May;9(9):1750-3. doi: 10.4161/cc.9.9.11792. Epub 2010 May 16. Cell Cycle. 2010. PMID: 20436287 No abstract available.

5

Cyclin-dependent kinases are regulators and effectors of oscillations driven by a transcription factor network.

Simmons Kovacs LA, Mayhew MB, Orlando DA, Jin Y, Li Q, Huang C, Reed SI, Mukherjee S, Haase SB. Simmons Kovacs LA, et al. Among authors: haase sb. Mol Cell. 2012 Mar 9;45(5):669-79. doi: 10.1016/j.molcel.2011.12.033. Epub 2012 Feb 2. Mol Cell. 2012. PMID: 22306294 Free PMC article.

6

Design and analysis of large-scale biological rhythm studies: a comparison of algorithms for detecting periodic signals in biological data.

Deckard A, Anafi RC, Hogenesch JB, Haase SB, Harer J. Deckard A, et al. Among authors: haase sb. Bioinformatics. 2013 Dec 15;29(24):3174-80. doi: 10.1093/bioinformatics/btt541. Epub 2013 Sep 20. Bioinformatics. 2013. PMID: 24058056 Free PMC article.

7

Cell cycle-regulated transcription: effectively using a genomics toolbox.

Bristow SL, Leman AR, Haase SB. Bristow SL, et al. Among authors: haase sb. Methods Mol Biol. 2014;1170:3-27. doi: 10.1007/978-1-4939-0888-2_1. Methods Mol Biol. 2014. PMID: 24906306 Free PMC article.

8

Analyzing transcription dynamics during the budding yeast cell cycle.

Leman AR, Bristow SL, Haase SB. Leman AR, et al. Among authors: haase sb. Methods Mol Biol. 2014;1170:295-312. doi: 10.1007/978-1-4939-0888-2_14. Methods Mol Biol. 2014. PMID: 24906319

9

SW1PerS: Sliding windows and 1-persistence scoring; discovering periodicity in gene expression time series data.

Perea JA, Deckard A, Haase SB, Harer J. Perea JA, et al. Among authors: haase sb. BMC Bioinformatics. 2015 Aug 16;16:257. doi: 10.1186/s12859-015-0645-6. BMC Bioinformatics. 2015. PMID: 26277424 Free PMC article.

10

The Local Edge Machine: inference of dynamic models of gene regulation.

McGoff KA, Guo X, Deckard A, Kelliher CM, Leman AR, Francey LJ, Hogenesch JB, Haase SB, Harer JL. McGoff KA, et al. Among authors: haase sb. Genome Biol. 2016 Oct 19;17(1):214. doi: 10.1186/s13059-016-1076-z. Genome Biol. 2016. PMID: 27760556 Free PMC article.

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