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Multi-species, multi-transcription factor binding highlights conserved control of tissue-specific biological pathways.
Ballester B, Medina-Rivera A, Schmidt D, Gonzàlez-Porta M, Carlucci M, Chen X, Chessman K, Faure AJ, Funnell AP, Goncalves A, Kutter C, Lukk M, Menon S, McLaren WM, Stefflova K, Watt S, Weirauch MT, Crossley M, Marioni JC, Odom DT, Flicek P, Wilson MD. Ballester B, et al. Among authors: weirauch mt. Elife. 2014 Oct 3;3:e02626. doi: 10.7554/eLife.02626. Elife. 2014. PMID: 25279814 Free PMC article.
Determination and inference of eukaryotic transcription factor sequence specificity.
Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, Walhout AJM, Bouget FY, Ratsch G, Larrondo LF, Ecker JR, Hughes TR. Weirauch MT, et al. Cell. 2014 Sep 11;158(6):1431-1443. doi: 10.1016/j.cell.2014.08.009. Cell. 2014. PMID: 25215497 Free PMC article.
Mapping and dynamics of regulatory DNA and transcription factor networks in A. thaliana.
Sullivan AM, Arsovski AA, Lempe J, Bubb KL, Weirauch MT, Sabo PJ, Sandstrom R, Thurman RE, Neph S, Reynolds AP, Stergachis AB, Vernot B, Johnson AK, Haugen E, Sullivan ST, Thompson A, Neri FV 3rd, Weaver M, Diegel M, Mnaimneh S, Yang A, Hughes TR, Nemhauser JL, Queitsch C, Stamatoyannopoulos JA. Sullivan AM, et al. Among authors: weirauch mt. Cell Rep. 2014 Sep 25;8(6):2015-2030. doi: 10.1016/j.celrep.2014.08.019. Epub 2014 Sep 15. Cell Rep. 2014. PMID: 25220462 Free article.
Transcription Factor Repertoire of Homeostatic Eosinophilopoiesis.
Bouffi C, Kartashov AV, Schollaert KL, Chen X, Bacon WC, Weirauch MT, Barski A, Fulkerson PC. Bouffi C, et al. Among authors: weirauch mt. J Immunol. 2015 Sep 15;195(6):2683-95. doi: 10.4049/jimmunol.1500510. Epub 2015 Aug 12. J Immunol. 2015. PMID: 26268651 Free PMC article.
Multiple layers of transcriptional regulation by PLZF in NKT-cell development.
Mao AP, Constantinides MG, Mathew R, Zuo Z, Chen X, Weirauch MT, Bendelac A. Mao AP, et al. Among authors: weirauch mt. Proc Natl Acad Sci U S A. 2016 Jul 5;113(27):7602-7. doi: 10.1073/pnas.1601504113. Epub 2016 Jun 20. Proc Natl Acad Sci U S A. 2016. PMID: 27325774 Free PMC article.
A FOXO1-induced oncogenic network defines the AML1-ETO preleukemic program.
Lin S, Ptasinska A, Chen X, Shrestha M, Assi SA, Chin PS, Imperato MR, Aronow BJ, Zhang J, Weirauch MT, Bonifer C, Mulloy JC. Lin S, et al. Among authors: weirauch mt. Blood. 2017 Sep 7;130(10):1213-1222. doi: 10.1182/blood-2016-11-750976. Epub 2017 Jul 14. Blood. 2017. PMID: 28710059 Free PMC article.
183 results