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SOAPdenovo-Trans: de novo transcriptome assembly with short RNA-Seq reads.
Xie Y, Wu G, Tang J, Luo R, Patterson J, Liu S, Huang W, He G, Gu S, Li S, Zhou X, Lam TW, Li Y, Xu X, Wong GK, Wang J. Xie Y, et al. Among authors: zhou x. Bioinformatics. 2014 Jun 15;30(12):1660-6. doi: 10.1093/bioinformatics/btu077. Epub 2014 Feb 13. Bioinformatics. 2014. PMID: 24532719
Phylogenomics resolves the timing and pattern of insect evolution.
Misof B, Liu S, Meusemann K, Peters RS, Donath A, Mayer C, Frandsen PB, Ware J, Flouri T, Beutel RG, Niehuis O, Petersen M, Izquierdo-Carrasco F, Wappler T, Rust J, Aberer AJ, Aspöck U, Aspöck H, Bartel D, Blanke A, Berger S, Böhm A, Buckley TR, Calcott B, Chen J, Friedrich F, Fukui M, Fujita M, Greve C, Grobe P, Gu S, Huang Y, Jermiin LS, Kawahara AY, Krogmann L, Kubiak M, Lanfear R, Letsch H, Li Y, Li Z, Li J, Lu H, Machida R, Mashimo Y, Kapli P, McKenna DD, Meng G, Nakagaki Y, Navarrete-Heredia JL, Ott M, Ou Y, Pass G, Podsiadlowski L, Pohl H, von Reumont BM, Schütte K, Sekiya K, Shimizu S, Slipinski A, Stamatakis A, Song W, Su X, Szucsich NU, Tan M, Tan X, Tang M, Tang J, Timelthaler G, Tomizuka S, Trautwein M, Tong X, Uchifune T, Walzl MG, Wiegmann BM, Wilbrandt J, Wipfler B, Wong TK, Wu Q, Wu G, Xie Y, Yang S, Yang Q, Yeates DK, Yoshizawa K, Zhang Q, Zhang R, Zhang W, Zhang Y, Zhao J, Zhou C, Zhou L, Ziesmann T, Zou S, Li Y, Xu X, Zhang Y, Yang H, Wang J, Wang J, Kjer KM, Zhou X. Misof B, et al. Among authors: zhou x, zhou c, zhou l. Science. 2014 Nov 7;346(6210):763-7. doi: 10.1126/science.1257570. Epub 2014 Nov 6. Science. 2014. PMID: 25378627
Mitochondrial genome of Hylaeus dilatatus (Hymenoptera: Colletidae).
Tan M, Zhang R, Hardman C, Zhou X. Tan M, et al. Among authors: zhou x. Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Nov;27(6):3975-3976. doi: 10.3109/19401736.2014.989511. Epub 2015 Jan 28. Mitochondrial DNA A DNA Mapp Seq Anal. 2016. PMID: 25627318
Evolution of neuropeptides in non-pterygote hexapods.
Derst C, Dircksen H, Meusemann K, Zhou X, Liu S, Predel R. Derst C, et al. Among authors: zhou x. BMC Evol Biol. 2016 Feb 29;16:51. doi: 10.1186/s12862-016-0621-4. BMC Evol Biol. 2016. PMID: 26923142 Free PMC article.
Mitochondrial metagenomics: letting the genes out of the bottle.
Crampton-Platt A, Yu DW, Zhou X, Vogler AP. Crampton-Platt A, et al. Among authors: zhou x. Gigascience. 2016 Mar 22;5:15. doi: 10.1186/s13742-016-0120-y. eCollection 2016. Gigascience. 2016. PMID: 27006764 Free PMC article. Review.
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