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Phylogenomics resolves the timing and pattern of insect evolution.
Misof B, Liu S, Meusemann K, Peters RS, Donath A, Mayer C, Frandsen PB, Ware J, Flouri T, Beutel RG, Niehuis O, Petersen M, Izquierdo-Carrasco F, Wappler T, Rust J, Aberer AJ, Aspöck U, Aspöck H, Bartel D, Blanke A, Berger S, Böhm A, Buckley TR, Calcott B, Chen J, Friedrich F, Fukui M, Fujita M, Greve C, Grobe P, Gu S, Huang Y, Jermiin LS, Kawahara AY, Krogmann L, Kubiak M, Lanfear R, Letsch H, Li Y, Li Z, Li J, Lu H, Machida R, Mashimo Y, Kapli P, McKenna DD, Meng G, Nakagaki Y, Navarrete-Heredia JL, Ott M, Ou Y, Pass G, Podsiadlowski L, Pohl H, von Reumont BM, Schütte K, Sekiya K, Shimizu S, Slipinski A, Stamatakis A, Song W, Su X, Szucsich NU, Tan M, Tan X, Tang M, Tang J, Timelthaler G, Tomizuka S, Trautwein M, Tong X, Uchifune T, Walzl MG, Wiegmann BM, Wilbrandt J, Wipfler B, Wong TK, Wu Q, Wu G, Xie Y, Yang S, Yang Q, Yeates DK, Yoshizawa K, Zhang Q, Zhang R, Zhang W, Zhang Y, Zhao J, Zhou C, Zhou L, Ziesmann T, Zou S, Li Y, Xu X, Zhang Y, Yang H, Wang J, Wang J, Kjer KM, Zhou X. Misof B, et al. Among authors: stamatakis a. Science. 2014 Nov 7;346(6210):763-7. doi: 10.1126/science.1257570. Epub 2014 Nov 6. Science. 2014. PMID: 25378627
Uncovering hidden phylogenetic consensus in large data sets.
Pattengale ND, Aberer AJ, Swenson KM, Stamatakis A, Moret BM. Pattengale ND, et al. Among authors: stamatakis a. IEEE/ACM Trans Comput Biol Bioinform. 2011 Jul-Aug;8(4):902-11. doi: 10.1109/TCBB.2011.28. IEEE/ACM Trans Comput Biol Bioinform. 2011. PMID: 21301032
Aligning short reads to reference alignments and trees.
Berger SA, Stamatakis A. Berger SA, et al. Among authors: stamatakis a. Bioinformatics. 2011 Aug 1;27(15):2068-75. doi: 10.1093/bioinformatics/btr320. Epub 2011 Jun 2. Bioinformatics. 2011. PMID: 21636595
A functional phylogenomic view of the seed plants.
Lee EK, Cibrian-Jaramillo A, Kolokotronis SO, Katari MS, Stamatakis A, Ott M, Chiu JC, Little DP, Stevenson DW, McCombie WR, Martienssen RA, Coruzzi G, Desalle R. Lee EK, et al. Among authors: stamatakis a. PLoS Genet. 2011 Dec;7(12):e1002411. doi: 10.1371/journal.pgen.1002411. Epub 2011 Dec 15. PLoS Genet. 2011. PMID: 22194700 Free PMC article.
217 results