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diXa: a data infrastructure for chemical safety assessment.
Hendrickx DM, Aerts HJ, Caiment F, Clark D, Ebbels TM, Evelo CT, Gmuender H, Hebels DG, Herwig R, Hescheler J, Jennen DG, Jetten MJ, Kanterakis S, Keun HC, Matser V, Overington JP, Pilicheva E, Sarkans U, Segura-Lepe MP, Sotiriadou I, Wittenberger T, Wittwehr C, Zanzi A, Kleinjans JC. Hendrickx DM, et al. Among authors: clark d. Bioinformatics. 2015 May 1;31(9):1505-7. doi: 10.1093/bioinformatics/btu827. Epub 2014 Dec 12. Bioinformatics. 2015. PMID: 25505093 Free PMC article.
Antibody informatics for drug discovery.
Shirai H, Prades C, Vita R, Marcatili P, Popovic B, Xu J, Overington JP, Hirayama K, Soga S, Tsunoyama K, Clark D, Lefranc MP, Ikeda K. Shirai H, et al. Among authors: clark d. Biochim Biophys Acta. 2014 Nov;1844(11):2002-2015. doi: 10.1016/j.bbapap.2014.07.006. Epub 2014 Aug 8. Biochim Biophys Acta. 2014. PMID: 25110827 Review.
SYMBIOmatics: synergies in Medical Informatics and Bioinformatics--exploring current scientific literature for emerging topics.
Rebholz-Schuhman D, Cameron G, Clark D, van Mulligen E, Coatrieux JL, Del Hoyo Barbolla E, Martin-Sanchez F, Milanesi L, Porro I, Beltrame F, Tollis I, Van der Lei J. Rebholz-Schuhman D, et al. Among authors: clark d. BMC Bioinformatics. 2007 Mar 8;8 Suppl 1(Suppl 1):S18. doi: 10.1186/1471-2105-8-S1-S18. BMC Bioinformatics. 2007. PMID: 17430562 Free PMC article. Review.
PDX-MI: Minimal Information for Patient-Derived Tumor Xenograft Models.
Meehan TF, Conte N, Goldstein T, Inghirami G, Murakami MA, Brabetz S, Gu Z, Wiser JA, Dunn P, Begley DA, Krupke DM, Bertotti A, Bruna A, Brush MH, Byrne AT, Caldas C, Christie AL, Clark DA, Dowst H, Dry JR, Doroshow JH, Duchamp O, Evrard YA, Ferretti S, Frese KK, Goodwin NC, Greenawalt D, Haendel MA, Hermans E, Houghton PJ, Jonkers J, Kemper K, Khor TO, Lewis MT, Lloyd KCK, Mason J, Medico E, Neuhauser SB, Olson JM, Peeper DS, Rueda OM, Seong JK, Trusolino L, Vinolo E, Wechsler-Reya RJ, Weinstock DM, Welm A, Weroha SJ, Amant F, Pfister SM, Kool M, Parkinson H, Butte AJ, Bult CJ. Meehan TF, et al. Among authors: clark da. Cancer Res. 2017 Nov 1;77(21):e62-e66. doi: 10.1158/0008-5472.CAN-17-0582. Cancer Res. 2017. PMID: 29092942 Free PMC article.
Positive feedbacks and alternative stable states in forest leaf types.
Zou Y, Zohner CM, Averill C, Ma H, Merder J, Berdugo M, Bialic-Murphy L, Mo L, Brun P, Zimmermann NE, Liang J, de-Miguel S, Nabuurs GJ, Reich PB, Niinements U, Dahlgren J, Kändler G, Ratcliffe S, Ruiz-Benito P, de Zavala MA; GFBI consortium; Crowther TW. Zou Y, et al. Nat Commun. 2024 May 31;15(1):4658. doi: 10.1038/s41467-024-48676-5. Nat Commun. 2024. PMID: 38821957 Free PMC article.
Gene expression signatures in blood from a West African sepsis cohort define host response phenotypes.
Chenoweth JG, Colantuoni C, Striegel DA, Genzor P, Brandsma J, Blair PW, Krishnan S, Chiyka E, Fazli M, Mehta R, Considine M, Cope L, Knight AC, Elayadi A, Fox A, Hertzano R, Letizia AG, Owusu-Ofori A, Boakye I, Aduboffour AA, Ansong D, Biney E, Oduro G, Schully KL, Clark DV. Chenoweth JG, et al. Among authors: clark dv. Nat Commun. 2024 May 30;15(1):4606. doi: 10.1038/s41467-024-48821-0. Nat Commun. 2024. PMID: 38816375 Free PMC article.
6,391 results