Plevritis SK - Search Results

1

Pancancer analysis of DNA methylation-driven genes using MethylMix.

Gevaert O, Tibshirani R, Plevritis SK. Gevaert O, et al. Among authors: plevritis sk. Genome Biol. 2015 Jan 29;16(1):17. doi: 10.1186/s13059-014-0579-8. Genome Biol. 2015. PMID: 25631659 Free PMC article.

2

Non-Small Cell Lung Cancer Radiogenomics Map Identifies Relationships between Molecular and Imaging Phenotypes with Prognostic Implications.

Zhou M, Leung A, Echegaray S, Gentles A, Shrager JB, Jensen KC, Berry GJ, Plevritis SK, Rubin DL, Napel S, Gevaert O. Zhou M, et al. Among authors: plevritis sk. Radiology. 2018 Jan;286(1):307-315. doi: 10.1148/radiol.2017161845. Epub 2017 Jul 20. Radiology. 2018. PMID: 28727543 Free PMC article.

3

Boolean implication networks derived from large scale, whole genome microarray datasets.

Sahoo D, Dill DL, Gentles AJ, Tibshirani R, Plevritis SK. Sahoo D, et al. Among authors: plevritis sk. Genome Biol. 2008 Oct 30;9(10):R157. doi: 10.1186/gb-2008-9-10-r157. Genome Biol. 2008. PMID: 18973690 Free PMC article.

4

Prediction of survival in diffuse large B-cell lymphoma based on the expression of 2 genes reflecting tumor and microenvironment.

Alizadeh AA, Gentles AJ, Alencar AJ, Liu CL, Kohrt HE, Houot R, Goldstein MJ, Zhao S, Natkunam Y, Advani RH, Gascoyne RD, Briones J, Tibshirani RJ, Myklebust JH, Plevritis SK, Lossos IS, Levy R. Alizadeh AA, et al. Among authors: plevritis sk. Blood. 2011 Aug 4;118(5):1350-8. doi: 10.1182/blood-2011-03-345272. Epub 2011 Jun 13. Blood. 2011. PMID: 21670469 Free PMC article.

5

Prediction of EGFR and KRAS mutation in non-small cell lung cancer using quantitative ¹⁸F FDG-PET/CT metrics.

Minamimoto R, Jamali M, Gevaert O, Echegaray S, Khuong A, Hoang CD, Shrager JB, Plevritis SK, Rubin DL, Leung AN, Napel S, Quon A. Minamimoto R, et al. Among authors: plevritis sk. Oncotarget. 2017 May 10;8(32):52792-52801. doi: 10.18632/oncotarget.17782. eCollection 2017 Aug 8. Oncotarget. 2017. PMID: 28881771 Free PMC article.

6

Mapping lung cancer epithelial-mesenchymal transition states and trajectories with single-cell resolution.

Karacosta LG, Anchang B, Ignatiadis N, Kimmey SC, Benson JA, Shrager JB, Tibshirani R, Bendall SC, Plevritis SK. Karacosta LG, et al. Among authors: plevritis sk. Nat Commun. 2019 Dec 6;10(1):5587. doi: 10.1038/s41467-019-13441-6. Nat Commun. 2019. PMID: 31811131 Free PMC article.

7

Bayesian gene set analysis for identifying significant biological pathways.

Shahbaba B, Tibshirani R, Shachaf CM, Plevritis SK. Shahbaba B, et al. Among authors: plevritis sk. J R Stat Soc Ser C Appl Stat. 2011 Aug 1;60(4):541-557. doi: 10.1111/j.1467-9876.2011.00765.x. J R Stat Soc Ser C Appl Stat. 2011. PMID: 21857748 Free PMC article.

8

DRUG-NEM: Optimizing drug combinations using single-cell perturbation response to account for intratumoral heterogeneity.

Anchang B, Davis KL, Fienberg HG, Williamson BD, Bendall SC, Karacosta LG, Tibshirani R, Nolan GP, Plevritis SK. Anchang B, et al. Among authors: plevritis sk. Proc Natl Acad Sci U S A. 2018 May 1;115(18):E4294-E4303. doi: 10.1073/pnas.1711365115. Epub 2018 Apr 13. Proc Natl Acad Sci U S A. 2018. PMID: 29654148 Free PMC article.

9

Predictive radiogenomics modeling of EGFR mutation status in lung cancer.

Gevaert O, Echegaray S, Khuong A, Hoang CD, Shrager JB, Jensen KC, Berry GJ, Guo HH, Lau C, Plevritis SK, Rubin DL, Napel S, Leung AN. Gevaert O, et al. Among authors: plevritis sk. Sci Rep. 2017 Jan 31;7:41674. doi: 10.1038/srep41674. Sci Rep. 2017. PMID: 28139704 Free PMC article.

10

A radiogenomic dataset of non-small cell lung cancer.

Bakr S, Gevaert O, Echegaray S, Ayers K, Zhou M, Shafiq M, Zheng H, Benson JA, Zhang W, Leung ANC, Kadoch M, Hoang CD, Shrager J, Quon A, Rubin DL, Plevritis SK, Napel S. Bakr S, et al. Among authors: plevritis sk. Sci Data. 2018 Oct 16;5:180202. doi: 10.1038/sdata.2018.202. Sci Data. 2018. PMID: 30325352 Free PMC article.

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