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Aquaria: simplifying discovery and insight from protein structures.
O'Donoghue SI, Sabir KS, Kalemanov M, Stolte C, Wellmann B, Ho V, Roos M, Perdigão N, Buske FA, Heinrich J, Rost B, Schafferhans A. O'Donoghue SI, et al. Among authors: schafferhans a. Nat Methods. 2015 Feb;12(2):98-9. doi: 10.1038/nmeth.3258. Nat Methods. 2015. PMID: 25633501 No abstract available.
Dark Proteins Important for Cellular Function.
Schafferhans A, O'Donoghue SI, Heinzinger M, Rost B. Schafferhans A, et al. Proteomics. 2018 Nov;18(21-22):e1800227. doi: 10.1002/pmic.201800227. Proteomics. 2018. PMID: 30318701
Integrated visual analysis of protein structures, sequences, and feature data.
Stolte C, Sabir KS, Heinrich J, Hammang CJ, Schafferhans A, O'Donoghue SI. Stolte C, et al. Among authors: schafferhans a. BMC Bioinformatics. 2015;16 Suppl 11(Suppl 11):S7. doi: 10.1186/1471-2105-16-S11-S7. Epub 2015 Aug 13. BMC Bioinformatics. 2015. PMID: 26329268 Free PMC article.
Unexpected features of the dark proteome.
Perdigão N, Heinrich J, Stolte C, Sabir KS, Buckley MJ, Tabor B, Signal B, Gloss BS, Hammang CJ, Rost B, Schafferhans A, O'Donoghue SI. Perdigão N, et al. Among authors: schafferhans a. Proc Natl Acad Sci U S A. 2015 Dec 29;112(52):15898-903. doi: 10.1073/pnas.1508380112. Epub 2015 Nov 17. Proc Natl Acad Sci U S A. 2015. PMID: 26578815 Free PMC article.
The SRS 3D module: integrating structures, sequences and features.
O'Donoghue SI, Meyer JE, Schafferhans A, Fries K. O'Donoghue SI, et al. Among authors: schafferhans a. Bioinformatics. 2004 Oct 12;20(15):2476-8. doi: 10.1093/bioinformatics/bth260. Epub 2004 Apr 15. Bioinformatics. 2004. PMID: 15087318
Visualization of macromolecular structures.
O'Donoghue SI, Goodsell DS, Frangakis AS, Jossinet F, Laskowski RA, Nilges M, Saibil HR, Schafferhans A, Wade RC, Westhof E, Olson AJ. O'Donoghue SI, et al. Among authors: schafferhans a. Nat Methods. 2010 Mar;7(3 Suppl):S42-55. doi: 10.1038/nmeth.1427. Epub 2010 Mar 1. Nat Methods. 2010. PMID: 20195256 Free PMC article. Review.
Taking structure searches to the next dimension.
Schafferhans A, Rost B. Schafferhans A, et al. Structure. 2014 Jul 8;22(7):938-9. doi: 10.1016/j.str.2014.06.007. Structure. 2014. PMID: 25007224 Free article.
PredictProtein--an open resource for online prediction of protein structural and functional features.
Yachdav G, Kloppmann E, Kajan L, Hecht M, Goldberg T, Hamp T, Hönigschmid P, Schafferhans A, Roos M, Bernhofer M, Richter L, Ashkenazy H, Punta M, Schlessinger A, Bromberg Y, Schneider R, Vriend G, Sander C, Ben-Tal N, Rost B. Yachdav G, et al. Among authors: schafferhans a. Nucleic Acids Res. 2014 Jul;42(Web Server issue):W337-43. doi: 10.1093/nar/gku366. Epub 2014 May 5. Nucleic Acids Res. 2014. PMID: 24799431 Free PMC article.
18 results