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BayesPeak--an R package for analysing ChIP-seq data.
Cairns J, Spyrou C, Stark R, Smith ML, Lynch AG, Tavaré S. Cairns J, et al. Among authors: lynch ag. Bioinformatics. 2011 Mar 1;27(5):713-4. doi: 10.1093/bioinformatics/btq685. Epub 2011 Jan 17. Bioinformatics. 2011. PMID: 21245054 Free PMC article.
A comparative analysis of whole genome sequencing of esophageal adenocarcinoma pre- and post-chemotherapy.
Noorani A, Bornschein J, Lynch AG, Secrier M, Achilleos A, Eldridge M, Bower L, Weaver JMJ, Crawte J, Ong CA, Shannon N, MacRae S, Grehan N, Nutzinger B, O'Donovan M, Hardwick R, Tavaré S, Fitzgerald RC; Oesophageal Cancer Clinical and Molecular Stratification (OCCAMS) Consortium. Noorani A, et al. Among authors: lynch ag. Genome Res. 2017 Jun;27(6):902-912. doi: 10.1101/gr.214296.116. Epub 2017 May 2. Genome Res. 2017. PMID: 28465312 Free PMC article.
Hidden copy number variation in the HapMap population.
Marioni JC, White M, Tavaré S, Lynch AG. Marioni JC, et al. Among authors: lynch ag. Proc Natl Acad Sci U S A. 2008 Jul 22;105(29):10067-72. doi: 10.1073/pnas.0711252105. Epub 2008 Jul 15. Proc Natl Acad Sci U S A. 2008. PMID: 18632583 Free PMC article.
Statistical issues in the analysis of Illumina data.
Dunning MJ, Barbosa-Morais NL, Lynch AG, Tavaré S, Ritchie ME. Dunning MJ, et al. Among authors: lynch ag. BMC Bioinformatics. 2008 Feb 6;9:85. doi: 10.1186/1471-2105-9-85. BMC Bioinformatics. 2008. PMID: 18254947 Free PMC article.
BayesPeak: Bayesian analysis of ChIP-seq data.
Spyrou C, Stark R, Lynch AG, Tavaré S. Spyrou C, et al. Among authors: lynch ag. BMC Bioinformatics. 2009 Sep 21;10:299. doi: 10.1186/1471-2105-10-299. BMC Bioinformatics. 2009. PMID: 19772557 Free PMC article.
HES5 silencing is an early and recurrent change in prostate tumourigenesis.
Massie CE, Spiteri I, Ross-Adams H, Luxton H, Kay J, Whitaker HC, Dunning MJ, Lamb AD, Ramos-Montoya A, Brewer DS, Cooper CS, Eeles R; UK Prostate ICGC Group; Warren AY, Tavaré S, Neal DE, Lynch AG. Massie CE, et al. Among authors: lynch ag. Endocr Relat Cancer. 2015 Apr;22(2):131-44. doi: 10.1530/ERC-14-0454. Epub 2015 Jan 5. Endocr Relat Cancer. 2015. PMID: 25560400 Free PMC article.
151 results