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Population genomic analysis of 962 whole genome sequences of humans reveals natural selection in non-coding regions.
Yu F, Lu J, Liu X, Gazave E, Chang D, Raj S, Hunter-Zinck H, Blekhman R, Arbiza L, Van Hout C, Morrison A, Johnson AD, Bis J, Cupples LA, Psaty BM, Muzny D, Yu J, Gibbs RA, Keinan A, Clark AG, Boerwinkle E. Yu F, et al. Among authors: arbiza l. PLoS One. 2015 Mar 25;10(3):e0121644. doi: 10.1371/journal.pone.0121644. eCollection 2015. PLoS One. 2015. PMID: 25807536 Free PMC article.
Indigenous Arabs are descendants of the earliest split from ancient Eurasian populations.
Rodriguez-Flores JL, Fakhro K, Agosto-Perez F, Ramstetter MD, Arbiza L, Vincent TL, Robay A, Malek JA, Suhre K, Chouchane L, Badii R, Al-Nabet Al-Marri A, Abi Khalil C, Zirie M, Jayyousi A, Salit J, Keinan A, Clark AG, Crystal RG, Mezey JG. Rodriguez-Flores JL, et al. Among authors: arbiza l. Genome Res. 2016 Feb;26(2):151-62. doi: 10.1101/gr.191478.115. Epub 2016 Jan 4. Genome Res. 2016. PMID: 26728717 Free PMC article.
The variant call format and VCFtools.
Danecek P, Auton A, Abecasis G, Albers CA, Banks E, DePristo MA, Handsaker RE, Lunter G, Marth GT, Sherry ST, McVean G, Durbin R; 1000 Genomes Project Analysis Group. Danecek P, et al. Bioinformatics. 2011 Aug 1;27(15):2156-8. doi: 10.1093/bioinformatics/btr330. Epub 2011 Jun 7. Bioinformatics. 2011. PMID: 21653522 Free PMC article.
Natural selection on functional modules, a genome-wide analysis.
Serra F, Arbiza L, Dopazo J, Dopazo H. Serra F, et al. Among authors: arbiza l. PLoS Comput Biol. 2011 Mar;7(3):e1001093. doi: 10.1371/journal.pcbi.1001093. Epub 2011 Mar 3. PLoS Comput Biol. 2011. PMID: 21390268 Free PMC article.
21 results