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An original phylogenetic approach identified mitochondrial haplogroup T1a1 as inversely associated with breast cancer risk in BRCA2 mutation carriers.
Breast Cancer Res. 2015 Apr 25;17(1):61. doi: 10.1186/s13058-015-0567-2.
Breast Cancer Res. 2015.
PMID: 25925750
Free PMC article.
ALTree: association detection and localization of susceptibility sites using haplotype phylogenetic trees.
Bardel C, Danjean V, Génin E.
Bardel C, et al. Among authors: danjean v.
Bioinformatics. 2006 Jun 1;22(11):1402-3. doi: 10.1093/bioinformatics/btl131. Epub 2006 Apr 4.
Bioinformatics. 2006.
PMID: 16595555
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On the use of haplotype phylogeny to detect disease susceptibility loci.
Bardel C, Danjean V, Hugot JP, Darlu P, Génin E.
Bardel C, et al. Among authors: danjean v.
BMC Genet. 2005 May 18;6:24. doi: 10.1186/1471-2156-6-24.
BMC Genet. 2005.
PMID: 15904492
Free PMC article.
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On the use of phylogeny-based tests to detect association between quantitative traits and haplotypes.
Bardel C, Danjean V, Morange P, Génin E, Darlu P.
Bardel C, et al. Among authors: danjean v.
Genet Epidemiol. 2009 Dec;33(8):729-39. doi: 10.1002/gepi.20425.
Genet Epidemiol. 2009.
PMID: 19399905
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Genome sequencing in cytogenetics: Comparison of short-read and linked-read approaches for germline structural variant detection and characterization.
Uguen K, Jubin C, Duffourd Y, Bardel C, Malan V, Dupont JM, El Khattabi L, Chatron N, Vitobello A, Rollat-Farnier PA, Baulard C, Lelorch M, Leduc A, Tisserant E, Tran Mau-Them F, Danjean V, Delepine M, Till M, Meyer V, Lyonnet S, Mosca-Boidron AL, Thevenon J, Faivre L, Thauvin-Robinet C, Schluth-Bolard C, Boland A, Olaso R, Callier P, Romana S, Deleuze JF, Sanlaville D.
Uguen K, et al. Among authors: danjean v.
Mol Genet Genomic Med. 2020 Mar;8(3):e1114. doi: 10.1002/mgg3.1114. Epub 2020 Jan 27.
Mol Genet Genomic Med. 2020.
PMID: 31985172
Free PMC article.
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Binary mesh partitioning for cache-efficient visualization.
Tchiboukdjian M, Danjean V, Raffin B.
Tchiboukdjian M, et al. Among authors: danjean v.
IEEE Trans Vis Comput Graph. 2010 Sep-Oct;16(5):815-28. doi: 10.1109/TVCG.2010.19.
IEEE Trans Vis Comput Graph. 2010.
PMID: 20616396
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