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Rationale and Design of the Genomic Research in Alpha-1 Antitrypsin Deficiency and Sarcoidosis (GRADS) Study. Sarcoidosis Protocol.
Moller DR, Koth LL, Maier LA, Morris A, Drake W, Rossman M, Leader JK, Collman RG, Hamzeh N, Sweiss NJ, Zhang Y, O'Neal S, Senior RM, Becich M, Hochheiser HS, Kaminski N, Wisniewski SR, Gibson KF; GRADS Sarcoidosis Study Group. Moller DR, et al. Among authors: collman rg. Ann Am Thorac Soc. 2015 Oct;12(10):1561-71. doi: 10.1513/AnnalsATS.201503-172OT. Ann Am Thorac Soc. 2015. PMID: 26193069 Free PMC article.
Multicenter Comparison of Lung and Oral Microbiomes of HIV-infected and HIV-uninfected Individuals.
Beck JM, Schloss PD, Venkataraman A, Twigg H 3rd, Jablonski KA, Bushman FD, Campbell TB, Charlson ES, Collman RG, Crothers K, Curtis JL, Drews KL, Flores SC, Fontenot AP, Foulkes MA, Frank I, Ghedin E, Huang L, Lynch SV, Morris A, Palmer BE, Schmidt TM, Sodergren E, Weinstock GM, Young VB; Lung HIV Microbiome Project. Beck JM, et al. Among authors: collman rg. Am J Respir Crit Care Med. 2015 Dec 1;192(11):1335-44. doi: 10.1164/rccm.201501-0128OC. Am J Respir Crit Care Med. 2015. PMID: 26247840 Free PMC article.
Enrichment of the lung microbiome with oral taxa is associated with lung inflammation of a Th17 phenotype.
Segal LN, Clemente JC, Tsay JC, Koralov SB, Keller BC, Wu BG, Li Y, Shen N, Ghedin E, Morris A, Diaz P, Huang L, Wikoff WR, Ubeda C, Artacho A, Rom WN, Sterman DH, Collman RG, Blaser MJ, Weiden MD. Segal LN, et al. Among authors: collman rg. Nat Microbiol. 2016 Apr 4;1:16031. doi: 10.1038/nmicrobiol.2016.31. Nat Microbiol. 2016. PMID: 27572644 Free PMC article.
Microbial Lineages in Sarcoidosis. A Metagenomic Analysis Tailored for Low-Microbial Content Samples.
Clarke EL, Lauder AP, Hofstaedter CE, Hwang Y, Fitzgerald AS, Imai I, Biernat W, Rękawiecki B, Majewska H, Dubaniewicz A, Litzky LA, Feldman MD, Bittinger K, Rossman MD, Patterson KC, Bushman FD, Collman RG. Clarke EL, et al. Among authors: collman rg. Am J Respir Crit Care Med. 2018 Jan 15;197(2):225-234. doi: 10.1164/rccm.201705-0891OC. Am J Respir Crit Care Med. 2018. PMID: 28846439 Free PMC article.
Application of "Omics" and Systems Biology to Sarcoidosis Research.
Crouser ED, Fingerlin TE, Yang IV, Maier LA, Nana-Sinkam P, Collman RG, Kaminski N. Crouser ED, et al. Among authors: collman rg. Ann Am Thorac Soc. 2017 Dec;14(Supplement_6):S445-S451. doi: 10.1513/AnnalsATS.201707-567OT. Ann Am Thorac Soc. 2017. PMID: 29053026 Free PMC article. Review.
Upper Respiratory Dysbiosis with a Facultative-dominated Ecotype in Advanced Lung Disease and Dynamic Change after Lung Transplant.
Simon-Soro A, Sohn MB, McGinniss JE, Imai I, Brown MC, Knecht VR, Bailey A, Clarke EL, Cantu E, Li H, Bittinger K, Diamond JM, Christie JD, Bushman FD, Collman RG. Simon-Soro A, et al. Among authors: collman rg. Ann Am Thorac Soc. 2019 Nov;16(11):1383-1391. doi: 10.1513/AnnalsATS.201904-299OC. Ann Am Thorac Soc. 2019. PMID: 31415219 Free PMC article.
Gene coexpression networks reveal novel molecular endotypes in alpha-1 antitrypsin deficiency.
Chu JH, Zang W, Vukmirovic M, Yan X, Adams T, DeIuliis G, Hu B, Mihaljinec A, Schupp JC, Becich MJ, Hochheiser H, Gibson KF, Chen ES, Morris A, Leader JK, Wisniewski SR, Zhang Y, Sciurba FC, Collman RG, Sandhaus R, Herzog EL, Patterson KC, Sauler M, Strange C, Kaminski N; GRADS Investigators. Chu JH, et al. Among authors: collman rg. Thorax. 2021 Feb;76(2):134-143. doi: 10.1136/thoraxjnl-2019-214301. Epub 2020 Dec 10. Thorax. 2021. PMID: 33303696 Free PMC article.
Transcriptomics of bronchoalveolar lavage cells identifies new molecular endotypes of sarcoidosis.
Vukmirovic M, Yan X, Gibson KF, Gulati M, Schupp JC, DeIuliis G, Adams TS, Hu B, Mihaljinec A, Woolard TN, Lynn H, Emeagwali N, Herzog EL, Chen ES, Morris A, Leader JK, Zhang Y, Garcia JGN, Maier LA, Collman RG, Drake WP, Becich MJ, Hochheiser H, Wisniewski SR, Benos PV, Moller DR, Prasse A, Koth LL, Kaminski N; GRADS Investigators. Vukmirovic M, et al. Among authors: collman rg. Eur Respir J. 2021 Dec 2;58(6):2002950. doi: 10.1183/13993003.02950-2020. Print 2021 Dec. Eur Respir J. 2021. PMID: 34083402 Free PMC article.
231 results