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Group-based variant calling leveraging next-generation supercomputing for large-scale whole-genome sequencing studies.
Standish KA, Carland TM, Lockwood GK, Pfeiffer W, Tatineni M, Huang CC, Lamberth S, Cherkas Y, Brodmerkel C, Jaeger E, Smith L, Rajagopal G, Curran ME, Schork NJ. Standish KA, et al. Among authors: cherkas y. BMC Bioinformatics. 2015 Sep 22;16(1):304. doi: 10.1186/s12859-015-0736-4. BMC Bioinformatics. 2015. PMID: 26395405 Free PMC article.
BEaST: brain extraction based on nonlocal segmentation technique.
Eskildsen SF, Coupé P, Fonov V, Manjón JV, Leung KK, Guizard N, Wassef SN, Østergaard LR, Collins DL; Alzheimer's Disease Neuroimaging Initiative. Eskildsen SF, et al. Neuroimage. 2012 Feb 1;59(3):2362-73. doi: 10.1016/j.neuroimage.2011.09.012. Epub 2011 Sep 16. Neuroimage. 2012. PMID: 21945694 Free article.
Genomic alterations in plasma DNA from patients with metastasized prostate cancer receiving abiraterone or enzalutamide.
Belic J, Graf R, Bauernhofer T, Cherkas Y, Ulz P, Waldispuehl-Geigl J, Perakis S, Gormley M, Patel J, Li W, Geigl JB, Smirnov D, Heitzer E, Gross M, Speicher MR. Belic J, et al. Among authors: cherkas y. Int J Cancer. 2018 Sep 1;143(5):1236-1248. doi: 10.1002/ijc.31397. Epub 2018 Apr 10. Int J Cancer. 2018. PMID: 29574703 Free PMC article.
16 results