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Do genome-scale models need exact solvers or clearer standards?
Ebrahim A, Almaas E, Bauer E, Bordbar A, Burgard AP, Chang RL, Dräger A, Famili I, Feist AM, Fleming RM, Fong SS, Hatzimanikatis V, Herrgård MJ, Holder A, Hucka M, Hyduke D, Jamshidi N, Lee SY, Le Novère N, Lerman JA, Lewis NE, Ma D, Mahadevan R, Maranas C, Nagarajan H, Navid A, Nielsen J, Nielsen LK, Nogales J, Noronha A, Pal C, Palsson BO, Papin JA, Patil KR, Price ND, Reed JL, Saunders M, Senger RS, Sonnenschein N, Sun Y, Thiele I. Ebrahim A, et al. Among authors: almaas e. Mol Syst Biol. 2015 Oct 14;11(10):831. doi: 10.15252/msb.20156157. Mol Syst Biol. 2015. PMID: 26467284 Free PMC article. No abstract available.
Genetic noise control via protein oligomerization.
Ghim CM, Almaas E. Ghim CM, et al. Among authors: almaas e. BMC Syst Biol. 2008 Nov 3;2:94. doi: 10.1186/1752-0509-2-94. BMC Syst Biol. 2008. PMID: 18980697 Free PMC article.
Systems biology of microbial communities.
Navid A, Ghim CM, Fenley AT, Yoon S, Lee S, Almaas E. Navid A, et al. Among authors: almaas e. Methods Mol Biol. 2009;500:469-94. doi: 10.1007/978-1-59745-525-1_16. Methods Mol Biol. 2009. PMID: 19399434
Robust Analysis of Fluxes in Genome-Scale Metabolic Pathways.
MacGillivray M, Ko A, Gruber E, Sawyer M, Almaas E, Holder A. MacGillivray M, et al. Among authors: almaas e. Sci Rep. 2017 Mar 21;7(1):268. doi: 10.1038/s41598-017-00170-3. Sci Rep. 2017. PMID: 28325918 Free PMC article.
Predictive evolution of metabolic phenotypes using model-designed environments.
Jouhten P, Konstantinidis D, Pereira F, Andrejev S, Grkovska K, Castillo S, Ghiachi P, Beltran G, Almaas E, Mas A, Warringer J, Gonzalez R, Morales P, Patil KR. Jouhten P, et al. Among authors: almaas e. Mol Syst Biol. 2022 Oct;18(10):e10980. doi: 10.15252/msb.202210980. Mol Syst Biol. 2022. PMID: 36201279 Free PMC article.
67 results