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Tools and data services registry: a community effort to document bioinformatics resources.
Nucleic Acids Res. 2016 Jan 4;44(D1):D38-47. doi: 10.1093/nar/gkv1116. Epub 2015 Nov 3.
Nucleic Acids Res. 2016.
PMID: 26538599
Free PMC article.
Novel variation and de novo mutation rates in population-wide de novo assembled Danish trios.
Besenbacher S, Liu S, Izarzugaza JM, Grove J, Belling K, Bork-Jensen J, Huang S, Als TD, Li S, Yadav R, Rubio-García A, Lescai F, Demontis D, Rao J, Ye W, Mailund T, Friborg RM, Pedersen CN, Xu R, Sun J, Liu H, Wang O, Cheng X, Flores D, Rydza E, Rapacki K, Damm Sørensen J, Chmura P, Westergaard D, Dworzynski P, Sørensen TI, Lund O, Hansen T, Xu X, Li N, Bolund L, Pedersen O, Eiberg H, Krogh A, Børglum AD, Brunak S, Kristiansen K, Schierup MH, Wang J, Gupta R, Villesen P, Rasmussen S.
Besenbacher S, et al. Among authors: friborg rm.
Nat Commun. 2015 Jan 19;6:5969. doi: 10.1038/ncomms6969.
Nat Commun. 2015.
PMID: 25597990
Free PMC article.
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CATCHprofiles: clustering and alignment tool for ChIP profiles.
Nielsen FG, Markus KG, Friborg RM, Favrholdt LM, Stunnenberg HG, Huynen M.
Nielsen FG, et al. Among authors: friborg rm.
PLoS One. 2012;7(1):e28272. doi: 10.1371/journal.pone.0028272. Epub 2012 Jan 4.
PLoS One. 2012.
PMID: 22238575
Free PMC article.
Item in Clipboard
Sequencing and de novo assembly of 150 genomes from Denmark as a population reference.
Maretty L, Jensen JM, Petersen B, Sibbesen JA, Liu S, Villesen P, Skov L, Belling K, Theil Have C, Izarzugaza JMG, Grosjean M, Bork-Jensen J, Grove J, Als TD, Huang S, Chang Y, Xu R, Ye W, Rao J, Guo X, Sun J, Cao H, Ye C, van Beusekom J, Espeseth T, Flindt E, Friborg RM, Halager AE, Le Hellard S, Hultman CM, Lescai F, Li S, Lund O, Løngren P, Mailund T, Matey-Hernandez ML, Mors O, Pedersen CNS, Sicheritz-Pontén T, Sullivan P, Syed A, Westergaard D, Yadav R, Li N, Xu X, Hansen T, Krogh A, Bolund L, Sørensen TIA, Pedersen O, Gupta R, Rasmussen S, Besenbacher S, Børglum AD, Wang J, Eiberg H, Kristiansen K, Brunak S, Schierup MH.
Maretty L, et al. Among authors: friborg rm.
Nature. 2017 Aug 3;548(7665):87-91. doi: 10.1038/nature23264. Epub 2017 Jul 26.
Nature. 2017.
PMID: 28746312
Free article.
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Assembly and analysis of 100 full MHC haplotypes from the Danish population.
Jensen JM, Villesen P, Friborg RM; Danish Pan-Genome Consortium; Mailund T, Besenbacher S, Schierup MH.
Jensen JM, et al. Among authors: friborg rm.
Genome Res. 2017 Sep;27(9):1597-1607. doi: 10.1101/gr.218891.116. Epub 2017 Aug 3.
Genome Res. 2017.
PMID: 28774965
Free PMC article.
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Benchmarking the HLA typing performance of Polysolver and Optitype in 50 Danish parental trios.
Matey-Hernandez ML; Danish Pan Genome Consortium; Brunak S, Izarzugaza JMG.
Matey-Hernandez ML, et al.
BMC Bioinformatics. 2018 Jun 25;19(1):239. doi: 10.1186/s12859-018-2239-6.
BMC Bioinformatics. 2018.
PMID: 29940840
Free PMC article.
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Discovery, genotyping and characterization of structural variation and novel sequence at single nucleotide resolution from de novo genome assemblies on a population scale.
Liu S, Huang S, Rao J, Ye W; Genome Denmark ConsortiumII; Krogh A, Wang J.
Liu S, et al.
Gigascience. 2015 Dec 24;4:64. doi: 10.1186/s13742-015-0103-4. eCollection 2015.
Gigascience. 2015.
PMID: 26705468
Free PMC article.
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