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Gene co-expression analysis identifies brain regions and cell types involved in migraine pathophysiology: a GWAS-based study using the Allen Human Brain Atlas.
Hum Genet. 2016 Apr;135(4):425-439. doi: 10.1007/s00439-016-1638-x. Epub 2016 Feb 22.
Hum Genet. 2016.
PMID: 26899160
Free PMC article.
Cortical Spreading Depression Causes Unique Dysregulation of Inflammatory Pathways in a Transgenic Mouse Model of Migraine.
Eising E, Shyti R, 't Hoen PAC, Vijfhuizen LS, Huisman SMH, Broos LAM, Mahfouz A, Reinders MJT, Ferrari MD, Tolner EA, de Vries B, van den Maagdenberg AMJM.
Eising E, et al. Among authors: huisman smh.
Mol Neurobiol. 2017 May;54(4):2986-2996. doi: 10.1007/s12035-015-9681-5. Epub 2016 Mar 31.
Mol Neurobiol. 2017.
PMID: 27032388
Free PMC article.
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Brain transcriptome atlases: a computational perspective.
Mahfouz A, Huisman SMH, Lelieveldt BPF, Reinders MJT.
Mahfouz A, et al. Among authors: huisman smh.
Brain Struct Funct. 2017 May;222(4):1557-1580. doi: 10.1007/s00429-016-1338-2. Epub 2016 Dec 1.
Brain Struct Funct. 2017.
PMID: 27909802
Free PMC article.
Review.
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Visualizing the spatial gene expression organization in the brain through non-linear similarity embeddings.
Mahfouz A, van de Giessen M, van der Maaten L, Huisman S, Reinders M, Hawrylycz MJ, Lelieveldt BP.
Mahfouz A, et al.
Methods. 2015 Feb;73:79-89. doi: 10.1016/j.ymeth.2014.10.004. Epub 2014 Oct 16.
Methods. 2015.
PMID: 25449901
Free article.
Item in Clipboard
BrainScope: interactive visual exploration of the spatial and temporal human brain transcriptome.
Huisman SMH, van Lew B, Mahfouz A, Pezzotti N, Höllt T, Michielsen L, Vilanova A, Reinders MJT, Lelieveldt BPF.
Huisman SMH, et al.
Nucleic Acids Res. 2017 Jun 2;45(10):e83. doi: 10.1093/nar/gkx046.
Nucleic Acids Res. 2017.
PMID: 28132031
Free PMC article.
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A structural equation model for imaging genetics using spatial transcriptomics.
Huisman SMH, Mahfouz A, Batmanghelich NK, Lelieveldt BPF, Reinders MJT; Alzheimer’s Disease Neuroimaging Initiative.
Huisman SMH, et al.
Brain Inform. 2018 Nov 2;5(2):13. doi: 10.1186/s40708-018-0091-0.
Brain Inform. 2018.
PMID: 30390165
Free PMC article.
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Pan-cancer subtyping in a 2D-map shows substructures that are driven by specific combinations of molecular characteristics.
Taskesen E, Huisman SM, Mahfouz A, Krijthe JH, de Ridder J, van de Stolpe A, van den Akker E, Verheagh W, Reinders MJ.
Taskesen E, et al.
Sci Rep. 2016 Apr 25;6:24949. doi: 10.1038/srep24949.
Sci Rep. 2016.
PMID: 27109935
Free PMC article.
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Author Correction: Pan-cancer subtyping in a 2D-map shows substructures that are driven by specific combinations of molecular characteristics.
Taskesen E, Huisman SMH, Mahfouz A, Krijthe JH, de Ridder J, van de Stolpe A, van den Akker E, Verhaegh W, Reinders MJT.
Taskesen E, et al. Among authors: huisman smh.
Sci Rep. 2018 Nov 23;8(1):17304. doi: 10.1038/s41598-018-35518-w.
Sci Rep. 2018.
PMID: 30470773
Free PMC article.
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