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A workflow to process 3D+time microscopy images of developing organisms and reconstruct their cell lineage.
Nat Commun. 2016 Feb 25;7:8674. doi: 10.1038/ncomms9674.
Nat Commun. 2016.
PMID: 26912388
Free PMC article.
Distribution of neurosensory progenitor pools during inner ear morphogenesis unveiled by cell lineage reconstruction.
Dyballa S, Savy T, Germann P, Mikula K, Remesikova M, Špir R, Zecca A, Peyriéras N, Pujades C.
Dyballa S, et al. Among authors: remesikova m.
Elife. 2017 Jan 4;6:e22268. doi: 10.7554/eLife.22268.
Elife. 2017.
PMID: 28051766
Free PMC article.
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Segmentation of 3D cell membrane images by PDE methods and its applications.
Mikula K, Peyriéras N, Remešíková M, Stašová O.
Mikula K, et al. Among authors: remesikova m.
Comput Biol Med. 2011 Jun;41(6):326-39. doi: 10.1016/j.compbiomed.2011.03.010. Epub 2011 Apr 15.
Comput Biol Med. 2011.
PMID: 21497333
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New robust algorithm for tracking cells in videos of Drosophila morphogenesis based on finding an ideal path in segmented spatio-temporal cellular structures.
Bellaïche Y, Bosveld F, Graner F, Mikula K, Remesíková M, Smísek M.
Bellaïche Y, et al. Among authors: remesikova m.
Annu Int Conf IEEE Eng Med Biol Soc. 2011;2011:6609-12. doi: 10.1109/IEMBS.2011.6091630.
Annu Int Conf IEEE Eng Med Biol Soc. 2011.
PMID: 22255854
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