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Standardized benchmarking in the quest for orthologs.
Altenhoff AM, Boeckmann B, Capella-Gutierrez S, Dalquen DA, DeLuca T, Forslund K, Huerta-Cepas J, Linard B, Pereira C, Pryszcz LP, Schreiber F, da Silva AS, Szklarczyk D, Train CM, Bork P, Lecompte O, von Mering C, Xenarios I, Sjölander K, Jensen LJ, Martin MJ, Muffato M; Quest for Orthologs consortium; Gabaldón T, Lewis SE, Thomas PD, Sonnhammer E, Dessimoz C. Altenhoff AM, et al. Among authors: bork p. Nat Methods. 2016 May;13(5):425-30. doi: 10.1038/nmeth.3830. Epub 2016 Apr 4. Nat Methods. 2016. PMID: 27043882 Free PMC article.
What's in a genome?
Bork P, Ouzounis C, Sander C, Scharf M, Schneider R, Sonnhammer E. Bork P, et al. Nature. 1992 Jul 23;358(6384):287. doi: 10.1038/358287a0. Nature. 1992. PMID: 1641000 No abstract available.
Genome phylogeny based on gene content.
Snel B, Bork P, Huynen MA. Snel B, et al. Among authors: bork p. Nat Genet. 1999 Jan;21(1):108-10. doi: 10.1038/5052. Nat Genet. 1999. PMID: 9916801
Teamed up for transcription.
von Mering C, Bork P. von Mering C, et al. Among authors: bork p. Nature. 2002 Jun 20;417(6891):797-8. doi: 10.1038/417797a. Nature. 2002. PMID: 12075329 No abstract available.
Function prediction and protein networks.
Huynen MA, Snel B, von Mering C, Bork P. Huynen MA, et al. Among authors: bork p. Curr Opin Cell Biol. 2003 Apr;15(2):191-8. doi: 10.1016/s0955-0674(03)00009-7. Curr Opin Cell Biol. 2003. PMID: 12648675 Review.
688 results