Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

Search Results

68 results

Filters applied: . Clear all
Results are displayed in a computed author sort order. The Results By Year timeline is not available.
Page 1
Standardized benchmarking in the quest for orthologs.
Altenhoff AM, Boeckmann B, Capella-Gutierrez S, Dalquen DA, DeLuca T, Forslund K, Huerta-Cepas J, Linard B, Pereira C, Pryszcz LP, Schreiber F, da Silva AS, Szklarczyk D, Train CM, Bork P, Lecompte O, von Mering C, Xenarios I, Sjölander K, Jensen LJ, Martin MJ, Muffato M; Quest for Orthologs consortium; Gabaldón T, Lewis SE, Thomas PD, Sonnhammer E, Dessimoz C. Altenhoff AM, et al. Among authors: sjolander k. Nat Methods. 2016 May;13(5):425-30. doi: 10.1038/nmeth.3830. Epub 2016 Apr 4. Nat Methods. 2016. PMID: 27043882 Free PMC article.
Big data and other challenges in the quest for orthologs.
Sonnhammer EL, Gabaldón T, Sousa da Silva AW, Martin M, Robinson-Rechavi M, Boeckmann B, Thomas PD, Dessimoz C; Quest for Orthologs consortium. Sonnhammer EL, et al. Bioinformatics. 2014 Nov 1;30(21):2993-8. doi: 10.1093/bioinformatics/btu492. Epub 2014 Jul 26. Bioinformatics. 2014. PMID: 25064571 Free PMC article.
Toward community standards in the quest for orthologs.
Dessimoz C, Gabaldón T, Roos DS, Sonnhammer EL, Herrero J; Quest for Orthologs Consortium. Dessimoz C, et al. Bioinformatics. 2012 Mar 15;28(6):900-4. doi: 10.1093/bioinformatics/bts050. Epub 2012 Feb 12. Bioinformatics. 2012. PMID: 22332236 Free PMC article.
Functional classification using phylogenomic inference.
Brown D, Sjölander K. Brown D, et al. Among authors: sjolander k. PLoS Comput Biol. 2006 Jun 30;2(6):e77. doi: 10.1371/journal.pcbi.0020077. PLoS Comput Biol. 2006. PMID: 16846248 Free PMC article. Review. No abstract available.
Phylogenomic inference of protein molecular function.
Krishnamurthy N, Sjölander K. Krishnamurthy N, et al. Among authors: sjolander k. Curr Protoc Bioinformatics. 2005 Oct;Chapter 6:Unit 6.9. doi: 10.1002/0471250953.bi0609s11. Curr Protoc Bioinformatics. 2005. PMID: 18428751
Active site prediction using evolutionary and structural information.
Sankararaman S, Sha F, Kirsch JF, Jordan MI, Sjölander K. Sankararaman S, et al. Among authors: sjolander k. Bioinformatics. 2010 Mar 1;26(5):617-24. doi: 10.1093/bioinformatics/btq008. Epub 2010 Jan 14. Bioinformatics. 2010. PMID: 20080507 Free PMC article.
68 results