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Quality control recommendations for RNASeq using FFPE samples based on pre-sequencing lab metrics and post-sequencing bioinformatics metrics.
Liu Y, Bhagwate A, Winham SJ, Stephens MT, Harker BW, McDonough SJ, Stallings-Mann ML, Heinzen EP, Vierkant RA, Hoskin TL, Frost MH, Carter JM, Pfrender ME, Littlepage L, Radisky DC, Cunningham JM, Degnim AC, Wang C. Liu Y, et al. Among authors: pfrender me. BMC Med Genomics. 2022 Sep 16;15(1):195. doi: 10.1186/s12920-022-01355-0. BMC Med Genomics. 2022. PMID: 36114500 Free PMC article.
An SNP-based second-generation genetic map of Daphnia magna and its application to QTL analysis of phenotypic traits.
Routtu J, Hall MD, Albere B, Beisel C, Bergeron RD, Chaturvedi A, Choi JH, Colbourne J, De Meester L, Stephens MT, Stelzer CP, Solorzano E, Thomas WK, Pfrender ME, Ebert D. Routtu J, et al. Among authors: pfrender me. BMC Genomics. 2014 Nov 27;15(1):1033. doi: 10.1186/1471-2164-15-1033. BMC Genomics. 2014. PMID: 25431334 Free PMC article.
A molecular mechanism of artemisinin resistance in Plasmodium falciparum malaria.
Mbengue A, Bhattacharjee S, Pandharkar T, Liu H, Estiu G, Stahelin RV, Rizk SS, Njimoh DL, Ryan Y, Chotivanich K, Nguon C, Ghorbal M, Lopez-Rubio JJ, Pfrender M, Emrich S, Mohandas N, Dondorp AM, Wiest O, Haldar K. Mbengue A, et al. Nature. 2015 Apr 30;520(7549):683-7. doi: 10.1038/nature14412. Epub 2015 Apr 15. Nature. 2015. PMID: 25874676 Free PMC article.
89 results