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Systematic Functional Interrogation of Rare Cancer Variants Identifies Oncogenic Alleles.
Cancer Discov. 2016 Jul;6(7):714-26. doi: 10.1158/2159-8290.CD-16-0160. Epub 2016 May 4.
Cancer Discov. 2016.
PMID: 27147599
Free PMC article.
High-throughput Phenotyping of Lung Cancer Somatic Mutations.
Berger AH, Brooks AN, Wu X, Shrestha Y, Chouinard C, Piccioni F, Bagul M, Kamburov A, Imielinski M, Hogstrom L, Zhu C, Yang X, Pantel S, Sakai R, Watson J, Kaplan N, Campbell JD, Singh S, Root DE, Narayan R, Natoli T, Lahr DL, Tirosh I, Tamayo P, Getz G, Wong B, Doench J, Subramanian A, Golub TR, Meyerson M, Boehm JS.
Berger AH, et al.
Cancer Cell. 2016 Aug 8;30(2):214-228. doi: 10.1016/j.ccell.2016.06.022. Epub 2016 Jul 28.
Cancer Cell. 2016.
PMID: 27478040
Free PMC article.
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NetSig: network-based discovery from cancer genomes.
Horn H, Lawrence MS, Chouinard CR, Shrestha Y, Hu JX, Worstell E, Shea E, Ilic N, Kim E, Kamburov A, Kashani A, Hahn WC, Campbell JD, Boehm JS, Getz G, Lage K.
Horn H, et al. Among authors: chouinard cr.
Nat Methods. 2018 Jan;15(1):61-66. doi: 10.1038/nmeth.4514. Epub 2017 Dec 4.
Nat Methods. 2018.
PMID: 29200198
Free PMC article.
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High-throughput Phenotyping of Lung Cancer Somatic Mutations.
Berger AH, Brooks AN, Wu X, Shrestha Y, Chouinard C, Piccioni F, Bagul M, Kamburov A, Imielinski M, Hogstrom L, Zhu C, Yang X, Pantel S, Sakai R, Watson J, Kaplan N, Campbell JD, Singh S, Root DE, Narayan R, Natoli T, Lahr DL, Tirosh I, Tamayo P, Getz G, Wong B, Doench J, Subramanian A, Golub TR, Meyerson M, Boehm JS.
Berger AH, et al.
Cancer Cell. 2017 Dec 11;32(6):884. doi: 10.1016/j.ccell.2017.11.008.
Cancer Cell. 2017.
PMID: 29232558
Free article.
No abstract available.
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Linking proteomic and transcriptional data through the interactome and epigenome reveals a map of oncogene-induced signaling.
Huang SS, Clarke DC, Gosline SJ, Labadorf A, Chouinard CR, Gordon W, Lauffenburger DA, Fraenkel E.
Huang SS, et al. Among authors: chouinard cr.
PLoS Comput Biol. 2013;9(2):e1002887. doi: 10.1371/journal.pcbi.1002887. Epub 2013 Feb 7.
PLoS Comput Biol. 2013.
PMID: 23408876
Free PMC article.
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Direct recruitment of polycomb repressive complex 1 to chromatin by core binding transcription factors.
Yu M, Mazor T, Huang H, Huang HT, Kathrein KL, Woo AJ, Chouinard CR, Labadorf A, Akie TE, Moran TB, Xie H, Zacharek S, Taniuchi I, Roeder RG, Kim CF, Zon LI, Fraenkel E, Cantor AB.
Yu M, et al. Among authors: chouinard cr.
Mol Cell. 2012 Feb 10;45(3):330-43. doi: 10.1016/j.molcel.2011.11.032.
Mol Cell. 2012.
PMID: 22325351
Free PMC article.
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Large-scale discovery of ERK2 substrates identifies ERK-mediated transcriptional regulation by ETV3.
Carlson SM, Chouinard CR, Labadorf A, Lam CJ, Schmelzle K, Fraenkel E, White FM.
Carlson SM, et al. Among authors: chouinard cr.
Sci Signal. 2011 Oct 25;4(196):rs11. doi: 10.1126/scisignal.2002010.
Sci Signal. 2011.
PMID: 22028470
Free PMC article.
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