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Haplotype estimation for biobank-scale data sets.
O'Connell J, Sharp K, Shrine N, Wain L, Hall I, Tobin M, Zagury JF, Delaneau O, Marchini J. O'Connell J, et al. Among authors: zagury jf. Nat Genet. 2016 Jul;48(7):817-20. doi: 10.1038/ng.3583. Epub 2016 Jun 6. Nat Genet. 2016. PMID: 27270105 Free PMC article.
Haplotype inference.
Delaneau O, Zagury JF. Delaneau O, et al. Among authors: zagury jf. Methods Mol Biol. 2012;888:177-96. doi: 10.1007/978-1-61779-870-2_11. Methods Mol Biol. 2012. PMID: 22665282
Haplotype estimation using sequencing reads.
Delaneau O, Howie B, Cox AJ, Zagury JF, Marchini J. Delaneau O, et al. Among authors: zagury jf. Am J Hum Genet. 2013 Oct 3;93(4):687-96. doi: 10.1016/j.ajhg.2013.09.002. Am J Hum Genet. 2013. PMID: 24094745 Free PMC article.
Accurate, scalable and integrative haplotype estimation.
Delaneau O, Zagury JF, Robinson MR, Marchini JL, Dermitzakis ET. Delaneau O, et al. Among authors: zagury jf. Nat Commun. 2019 Nov 28;10(1):5436. doi: 10.1038/s41467-019-13225-y. Nat Commun. 2019. PMID: 31780650 Free PMC article.
A general approach for haplotype phasing across the full spectrum of relatedness.
O'Connell J, Gurdasani D, Delaneau O, Pirastu N, Ulivi S, Cocca M, Traglia M, Huang J, Huffman JE, Rudan I, McQuillan R, Fraser RM, Campbell H, Polasek O, Asiki G, Ekoru K, Hayward C, Wright AF, Vitart V, Navarro P, Zagury JF, Wilson JF, Toniolo D, Gasparini P, Soranzo N, Sandhu MS, Marchini J. O'Connell J, et al. Among authors: zagury jf. PLoS Genet. 2014 Apr 17;10(4):e1004234. doi: 10.1371/journal.pgen.1004234. eCollection 2014 Apr. PLoS Genet. 2014. PMID: 24743097 Free PMC article.
ISHAPE: new rapid and accurate software for haplotyping.
Delaneau O, Coulonges C, Boelle PY, Nelson G, Spadoni JL, Zagury JF. Delaneau O, et al. Among authors: zagury jf. BMC Bioinformatics. 2007 Jun 15;8:205. doi: 10.1186/1471-2105-8-205. BMC Bioinformatics. 2007. PMID: 17573965 Free PMC article.
155 results