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A genome wide dosage suppressor network reveals genomic robustness.
Nucleic Acids Res. 2017 Jan 9;45(1):255-270. doi: 10.1093/nar/gkw1148. Epub 2016 Nov 29.
Nucleic Acids Res. 2017.
PMID: 27899637
Free PMC article.
Computational modeling in systems biology.
Vallabhajosyula RR, Raval A.
Vallabhajosyula RR, et al.
Methods Mol Biol. 2010;662:97-120. doi: 10.1007/978-1-60761-800-3_5.
Methods Mol Biol. 2010.
PMID: 20824468
Review.
Item in Clipboard
Identifying hubs in protein interaction networks.
Vallabhajosyula RR, Chakravarti D, Lutfeali S, Ray A, Raval A.
Vallabhajosyula RR, et al.
PLoS One. 2009;4(4):e5344. doi: 10.1371/journal.pone.0005344. Epub 2009 Apr 28.
PLoS One. 2009.
PMID: 19399170
Free PMC article.
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Conservation analysis of large biochemical networks.
Vallabhajosyula RR, Chickarmane V, Sauro HM.
Vallabhajosyula RR, et al.
Bioinformatics. 2006 Feb 1;22(3):346-53. doi: 10.1093/bioinformatics/bti800. Epub 2005 Nov 29.
Bioinformatics. 2006.
PMID: 16317075
Item in Clipboard
Automated refinement and inference of analytical models for metabolic networks.
Schmidt MD, Vallabhajosyula RR, Jenkins JW, Hood JE, Soni AS, Wikswo JP, Lipson H.
Schmidt MD, et al. Among authors: vallabhajosyula rr.
Phys Biol. 2011 Oct;8(5):055011. doi: 10.1088/1478-3975/8/5/055011. Epub 2011 Aug 10.
Phys Biol. 2011.
PMID: 21832805
Free PMC article.
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Stochastic simulation GUI for biochemical networks.
Vallabhajosyula RR, Sauro HM.
Vallabhajosyula RR, et al.
Bioinformatics. 2007 Jul 15;23(14):1859-61. doi: 10.1093/bioinformatics/btm231. Epub 2007 Jun 22.
Bioinformatics. 2007.
PMID: 17586553
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