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Collective repacking reveals that the structures of protein cores are uniquely specified by steric repulsive interactions.
Protein Eng Des Sel. 2017 May 1;30(5):387-394. doi: 10.1093/protein/gzx011.
Protein Eng Des Sel. 2017.
PMID: 28201818
Free PMC article.
Steric interactions determine side-chain conformations in protein cores.
Caballero D, Virrueta A, O'Hern CS, Regan L.
Caballero D, et al. Among authors: virrueta a.
Protein Eng Des Sel. 2016 Sep;29(9):367-376. doi: 10.1093/protein/gzw027. Epub 2016 Jul 14.
Protein Eng Des Sel. 2016.
PMID: 27416747
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Comparing side chain packing in soluble proteins, protein-protein interfaces, and transmembrane proteins.
Gaines JC, Acebes S, Virrueta A, Butler M, Regan L, O'Hern CS.
Gaines JC, et al. Among authors: virrueta a.
Proteins. 2018 May;86(5):581-591. doi: 10.1002/prot.25479. Epub 2018 Feb 26.
Proteins. 2018.
PMID: 29427530
Free PMC article.
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Understanding the physical basis for the side-chain conformational preferences of methionine.
Virrueta A, O'Hern CS, Regan L.
Virrueta A, et al.
Proteins. 2016 Jul;84(7):900-11. doi: 10.1002/prot.25026. Epub 2016 Apr 6.
Proteins. 2016.
PMID: 26917446
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Protein design: Past, present, and future.
Regan L, Caballero D, Hinrichsen MR, Virrueta A, Williams DM, O'Hern CS.
Regan L, et al. Among authors: virrueta a.
Biopolymers. 2015 Jul;104(4):334-50. doi: 10.1002/bip.22639.
Biopolymers. 2015.
PMID: 25784145
Free PMC article.
Review.
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Quantifying and optimizing single-molecule switching nanoscopy at high speeds.
Lin Y, Long JJ, Huang F, Duim WC, Kirschbaum S, Zhang Y, Schroeder LK, Rebane AA, Velasco MG, Virrueta A, Moonan DW, Jiao J, Hernandez SY, Zhang Y, Bewersdorf J.
Lin Y, et al. Among authors: virrueta a.
PLoS One. 2015 May 26;10(5):e0128135. doi: 10.1371/journal.pone.0128135. eCollection 2015.
PLoS One. 2015.
PMID: 26011109
Free PMC article.
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